RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 DDX46Q7L014 1031 aaKnown RBP13.43□□□□□ -0.26
VPS50-201ENST00000251739 TMC4Q7Z404 712 aa13.43□□□□□ -0.26
VPS50-201ENST00000251739 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
VPS50-201ENST00000251739 MYH3P11055 1940 aa13.43□□□□□ -0.26
VPS50-201ENST00000251739 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
VPS50-201ENST00000251739 FMR1Q06787 632 aaKnown RBP eCLIP13.42□□□□□ -0.264e-6■■■■□ 21.6
VPS50-201ENST00000251739 MPNDQ8N594 471 aa13.42□□□□□ -0.26
VPS50-201ENST00000251739 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
VPS50-201ENST00000251739 ADARB2Q9NS39 739 aaKnown RBP13.42□□□□□ -0.26
VPS50-201ENST00000251739 HYPKQ9NX55 129 aa13.42□□□□□ -0.26
VPS50-201ENST00000251739 LAS1LQ9Y4W2 734 aaKnown RBP13.42□□□□□ -0.26
VPS50-201ENST00000251739 POLR2AP24928 1970 aaKnown RBP13.41□□□□□ -0.26
VPS50-201ENST00000251739 YDJCA8MPS7 323 aa13.41□□□□□ -0.26
VPS50-201ENST00000251739 GMPSP49915 693 aaPredicted RBP13.41□□□□□ -0.26
VPS50-201ENST00000251739 DEFB115Q30KQ5 88 aa13.41□□□□□ -0.26
VPS50-201ENST00000251739 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
VPS50-201ENST00000251739 TMX4Q9H1E5 349 aaPredicted RBP13.41□□□□□ -0.26
VPS50-201ENST00000251739 PRDM10Q9NQV6 1147 aa13.41□□□□□ -0.26
VPS50-201ENST00000251739 IFT57Q9NWB7 429 aa13.41□□□□□ -0.26
VPS50-201ENST00000251739 PGAP2Q9UHJ9 254 aa13.41□□□□□ -0.26
VPS50-201ENST00000251739 ATP5J2-PTCD1G3V325 749 aa13.4□□□□□ -0.26
VPS50-201ENST00000251739 CST9Q5W186 159 aa13.4□□□□□ -0.26
VPS50-201ENST00000251739 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
VPS50-201ENST00000251739 CELF1Q92879 486 aaKnown RBP13.4□□□□□ -0.26
VPS50-201ENST00000251739 ZNF646O15015 1829 aaPredicted RBP13.4□□□□□ -0.26
VPS50-201ENST00000251739 WDR33Q9C0J8 1336 aaKnown RBP13.39□□□□□ -0.27
VPS50-201ENST00000251739 TRAF5O00463 557 aa13.39□□□□□ -0.27
VPS50-201ENST00000251739 APAF1O14727 1248 aa13.39□□□□□ -0.27
VPS50-201ENST00000251739 ZNF428Q96B54 188 aa13.39□□□□□ -0.27
VPS50-201ENST00000251739 CACNA1FO60840 1977 aa13.38□□□□□ -0.27
VPS50-201ENST00000251739 RAD17O75943 681 aa13.38□□□□□ -0.27
VPS50-201ENST00000251739 CTCFP49711 727 aaPredicted RBP13.38□□□□□ -0.27
VPS50-201ENST00000251739 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
VPS50-201ENST00000251739 GNAI1P63096 354 aa13.38□□□□□ -0.27
VPS50-201ENST00000251739 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
VPS50-201ENST00000251739 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
VPS50-201ENST00000251739 TLL2Q9Y6L7 1015 aa13.38□□□□□ -0.27
VPS50-201ENST00000251739 SPEF2Q9C093 1822 aa13.38□□□□□ -0.27
VPS50-201ENST00000251739 ZNF609O15014 1411 aa13.38□□□□□ -0.27
VPS50-201ENST00000251739 RTL9Q8NET4 1388 aa13.37□□□□□ -0.27
VPS50-201ENST00000251739 IRS4O14654 1257 aaPredicted RBP13.37□□□□□ -0.27
VPS50-201ENST00000251739 TNIP1Q15025 636 aa13.37□□□□□ -0.27
VPS50-201ENST00000251739 HS6ST3Q8IZP7 471 aa13.37□□□□□ -0.27
VPS50-201ENST00000251739 TRPM4Q8TD43 1214 aa13.37□□□□□ -0.27
VPS50-201ENST00000251739 ZC3H15Q8WU90 426 aaKnown RBP13.37□□□□□ -0.27
VPS50-201ENST00000251739 PHAXQ9H814 394 aaKnown RBP13.37□□□□□ -0.27
VPS50-201ENST00000251739 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
VPS50-201ENST00000251739 SHTN1A0MZ66 631 aa13.36□□□□□ -0.27
VPS50-201ENST00000251739 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
VPS50-201ENST00000251739 CALD1Q05682 793 aaKnown RBP13.36□□□□□ -0.27
VPS50-201ENST00000251739 ZBTB38Q8NAP3 1195 aaPredicted RBP13.36□□□□□ -0.27
VPS50-201ENST00000251739 C8orf58Q8NAV2 365 aa13.36□□□□□ -0.27
VPS50-201ENST00000251739 AIDAQ96BJ3 306 aa13.36□□□□□ -0.27
VPS50-201ENST00000251739 CAPNS2Q96L46 248 aa13.36□□□□□ -0.27
VPS50-201ENST00000251739 TMEM106CQ9BVX2 250 aa13.36□□□□□ -0.27
VPS50-201ENST00000251739 GLIS2Q9BZE0 524 aaPredicted RBP13.36□□□□□ -0.27
VPS50-201ENST00000251739 TTLL13PA6NNM8 815 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 STK25O00506 426 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 GPSM2P81274 684 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 MAP2K1Q02750 393 aaPredicted RBP13.35□□□□□ -0.27
VPS50-201ENST00000251739 GOLGA2Q08379 1002 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 WASHC4Q2M389 1173 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 RTL5Q5HYW3 569 aaPredicted RBP13.35□□□□□ -0.27
VPS50-201ENST00000251739 ASTLQ6HA08 431 aaPredicted RBP13.35□□□□□ -0.27
VPS50-201ENST00000251739 SAPCD2Q86UD0 394 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 CCDC191Q8NCU4 936 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 DPF2Q92785 391 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 PODXL2Q9NZ53 605 aa13.35□□□□□ -0.27
VPS50-201ENST00000251739 NSFL1CQ9UNZ2 370 aaKnown RBP13.35□□□□□ -0.27
VPS50-201ENST00000251739 PSMD14O00487 310 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 PCCAP05165 728 aaPredicted RBP13.34□□□□□ -0.27
VPS50-201ENST00000251739 ECE1P42892 770 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 LBX1P52954 281 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
VPS50-201ENST00000251739 CYP4F22Q6NT55 531 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 RIC3Q7Z5B4 369 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 MICALL2Q8IY33 904 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 TBC1D16Q8TBP0 767 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 HHIPL1Q96JK4 782 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 BCL2L13Q9BXK5 485 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 DBNDD1Q9H9R9 158 aa13.34□□□□□ -0.27
VPS50-201ENST00000251739 CNOT7Q9UIV1 285 aaKnown RBP13.34□□□□□ -0.27
VPS50-201ENST00000251739 ELL2O00472 640 aaPredicted RBP13.33□□□□□ -0.28
VPS50-201ENST00000251739 ECE2O60344 883 aa13.33□□□□□ -0.28
VPS50-201ENST00000251739 CELF2O95319 508 aaKnown RBP13.33□□□□□ -0.28
VPS50-201ENST00000251739 EGFRP00533 1210 aa13.33□□□□□ -0.28
VPS50-201ENST00000251739 RPS12P25398 132 aaKnown RBP13.33□□□□□ -0.28
VPS50-201ENST00000251739 MYD88Q99836 296 aa13.33□□□□□ -0.28
VPS50-201ENST00000251739 METTL22Q9BUU2 404 aaPredicted RBP13.33□□□□□ -0.28
VPS50-201ENST00000251739 SEC31BQ9NQW1 1179 aa13.33□□□□□ -0.28
VPS50-201ENST00000251739 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
VPS50-201ENST00000251739 HSP90B1P14625 803 aaKnown RBP13.32□□□□□ -0.28
VPS50-201ENST00000251739 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
VPS50-201ENST00000251739 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
VPS50-201ENST00000251739 TSPYL6Q8N831 410 aa13.32□□□□□ -0.28
VPS50-201ENST00000251739 GPR101Q96P66 508 aaPredicted RBP13.32□□□□□ -0.28
VPS50-201ENST00000251739 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
VPS50-201ENST00000251739 EYA3Q99504 573 aa13.32□□□□□ -0.28
VPS50-201ENST00000251739 KCNQ5Q9NR82 932 aa13.32□□□□□ -0.28
VPS50-201ENST00000251739 CWC25Q9NXE8 425 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms