RNA–Protein interactions for RNA: ENST00000248151.4

TUBBP1-201, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,335 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-201ENST00000248151 SNED1Q8TER0 1413 aa13.92□□□□□ -0.18
TUBBP1-201ENST00000248151 RTL9Q8NET4 1388 aa13.92□□□□□ -0.18
TUBBP1-201ENST00000248151 TAF5LO75529 589 aa13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 IARSP41252 1262 aaKnown RBP13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 AOC3Q16853 763 aa13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 LDHAL6AQ6ZMR3 332 aa13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 TMC4Q7Z404 712 aa13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 PSMD1Q99460 953 aa13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 LRRC37AA6NMS7 1700 aa13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 LTBP3Q9NS15 1303 aa13.91□□□□□ -0.18
TUBBP1-201ENST00000248151 GNAI2P04899 355 aa13.9□□□□□ -0.18
TUBBP1-201ENST00000248151 RFX5P48382 616 aaPredicted RBP13.9□□□□□ -0.18
TUBBP1-201ENST00000248151 MVPQ14764 893 aaKnown RBP13.9□□□□□ -0.18
TUBBP1-201ENST00000248151 LRRC24Q50LG9 513 aa13.9□□□□□ -0.18
TUBBP1-201ENST00000248151 TBC1D16Q8TBP0 767 aa13.9□□□□□ -0.18
TUBBP1-201ENST00000248151 CNNM1Q9NRU3 951 aa13.9□□□□□ -0.18
TUBBP1-201ENST00000248151 PA2G4Q9UQ80 394 aaKnown RBP13.9□□□□□ -0.18
TUBBP1-201ENST00000248151 PPIP5K2O43314 1243 aa13.9□□□□□ -0.19
TUBBP1-201ENST00000248151 UFL1O94874 794 aa13.9□□□□□ -0.19
TUBBP1-201ENST00000248151 MS4A1P11836 297 aa13.9□□□□□ -0.19
TUBBP1-201ENST00000248151 CHRNDQ07001 517 aa13.9□□□□□ -0.19
TUBBP1-201ENST00000248151 LARGE2Q8N3Y3 721 aa13.9□□□□□ -0.19
TUBBP1-201ENST00000248151 RTFDC1Q9BY42 306 aaPredicted RBP13.9□□□□□ -0.19
TUBBP1-201ENST00000248151 SUPT16HQ9Y5B9 1047 aaKnown RBP13.9□□□□□ -0.19
TUBBP1-201ENST00000248151 COL4A5P29400 1685 aa13.9□□□□□ -0.19
TUBBP1-201ENST00000248151 A0A1B0GUL6 1792 aa13.89□□□□□ -0.19
TUBBP1-201ENST00000248151 PNMA6EA0A0J9YXQ4 647 aa13.89□□□□□ -0.19
TUBBP1-201ENST00000248151 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
TUBBP1-201ENST00000248151 DOK7Q18PE1 504 aa13.89□□□□□ -0.19
TUBBP1-201ENST00000248151 WASHC4Q2M389 1173 aa13.89□□□□□ -0.19
TUBBP1-201ENST00000248151 GRIPAP1Q4V328 841 aa13.89□□□□□ -0.19
TUBBP1-201ENST00000248151 SIL1Q9H173 461 aa13.89□□□□□ -0.19
TUBBP1-201ENST00000248151 GGA1Q9UJY5 639 aa13.89□□□□□ -0.19
TUBBP1-201ENST00000248151 TIAM2Q8IVF5 1701 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 DUOX1Q9NRD9 1551 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 LTBP1Q14766 1721 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 SRGAP3O43295 1099 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 PDE3AQ14432 1141 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 SUPT20HQ8NEM7 779 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 KCNQ5Q9NR82 932 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 PODXL2Q9NZ53 605 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 HDAC5Q9UQL6 1122 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 RIPOR2Q9Y4F9 1068 aa13.88□□□□□ -0.19
TUBBP1-201ENST00000248151 XDHP47989 1333 aa13.87□□□□□ -0.19
TUBBP1-201ENST00000248151 ATP2B4P23634 1241 aa13.87□□□□□ -0.19
TUBBP1-201ENST00000248151 KLRK1P26718 216 aa13.87□□□□□ -0.19
TUBBP1-201ENST00000248151 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
TUBBP1-201ENST00000248151 TXNRD3Q86VQ6 643 aa13.87□□□□□ -0.19
TUBBP1-201ENST00000248151 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
TUBBP1-201ENST00000248151 DBNDD1Q9H9R9 158 aa13.87□□□□□ -0.19
TUBBP1-201ENST00000248151 DDNO94850 711 aaPredicted RBP13.86□□□□□ -0.19
TUBBP1-201ENST00000248151 JDP2Q8WYK2 163 aa13.86□□□□□ -0.19
TUBBP1-201ENST00000248151 ZC3H12CQ9C0D7 883 aaKnown RBP13.86□□□□□ -0.19
TUBBP1-201ENST00000248151 ANKRD2Q9GZV1 360 aa13.86□□□□□ -0.19
TUBBP1-201ENST00000248151 ZNF541Q9H0D2 1346 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 G3V3G9 751 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 EYA2O00167 538 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 KCNJ4P48050 445 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 KIAA2012Q0VF49 1180 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 METTL24Q5JXM2 366 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 DCAF8Q5TAQ9 597 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 ATG9AQ7Z3C6 839 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 CRBNQ96SW2 442 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 EYA3Q99504 573 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 ZBTB40Q9NUA8 1239 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 LEMD3Q9Y2U8 911 aa13.85□□□□□ -0.19
TUBBP1-201ENST00000248151 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
TUBBP1-201ENST00000248151 SCN9AQ15858 1988 aa13.84□□□□□ -0.19
TUBBP1-201ENST00000248151 YDJCA8MPS7 323 aa13.84□□□□□ -0.19
TUBBP1-201ENST00000248151 FZD9O00144 591 aa13.84□□□□□ -0.19
TUBBP1-201ENST00000248151 RAD17O75943 681 aa13.84□□□□□ -0.19
TUBBP1-201ENST00000248151 RRAGCQ9HB90 399 aa13.84□□□□□ -0.19
TUBBP1-201ENST00000248151 GJA3Q9Y6H8 435 aa13.84□□□□□ -0.19
TUBBP1-201ENST00000248151 GLTPD2A6NH11 291 aa13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 IRX6P78412 446 aaPredicted RBP13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 MTX1Q13505 466 aa13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 CEP85Q6P2H3 762 aa13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 VPS33BQ9H267 617 aa13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 NMRK2Q9NPI5 230 aa13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 ZNRF3Q9ULT6 936 aa13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.2
TUBBP1-201ENST00000248151 ECE2O60344 883 aa13.82□□□□□ -0.2
TUBBP1-201ENST00000248151 EIF6P56537 245 aaKnown RBP13.82□□□□□ -0.2
TUBBP1-201ENST00000248151 CXCL9Q07325 125 aa13.82□□□□□ -0.2
TUBBP1-201ENST00000248151 POLA2Q14181 598 aa13.82□□□□□ -0.2
TUBBP1-201ENST00000248151 COPRSQ9NQ92 184 aa13.82□□□□□ -0.2
TUBBP1-201ENST00000248151 MROH5Q6ZUA9 1318 aa13.82□□□□□ -0.2
TUBBP1-201ENST00000248151 POTECB2RU33 542 aa13.81□□□□□ -0.2
TUBBP1-201ENST00000248151 SURF6O75683 361 aaKnown RBP13.81□□□□□ -0.2
TUBBP1-201ENST00000248151 PDE8BO95263 885 aa13.81□□□□□ -0.2
TUBBP1-201ENST00000248151 SIRT2Q8IXJ6 389 aa13.81□□□□□ -0.2
TUBBP1-201ENST00000248151 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
TUBBP1-201ENST00000248151 SSH3Q8TE77 659 aa13.81□□□□□ -0.2
TUBBP1-201ENST00000248151 GPBP1L1Q9HC44 474 aaPredicted RBP13.81□□□□□ -0.2
TUBBP1-201ENST00000248151 GYG1P46976 350 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms