RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 SSRP1Q08945 709 aaKnown RBP18.33■□□□□ 0.53
SIN3B-201ENST00000248054 KLHL40Q2TBA0 621 aa18.33■□□□□ 0.53
SIN3B-201ENST00000248054 SSH3Q8TE77 659 aa18.33■□□□□ 0.53
SIN3B-201ENST00000248054 ERICH4A6NGS2 130 aa18.33■□□□□ 0.52
SIN3B-201ENST00000248054 SMC2O95347 1197 aa18.33■□□□□ 0.52
SIN3B-201ENST00000248054 RBM5P52756 815 aaKnown RBP eCLIP18.33■□□□□ 0.52
SIN3B-201ENST00000248054 STIM1Q13586 685 aa18.33■□□□□ 0.52
SIN3B-201ENST00000248054 CCDC178Q5BJE1 867 aa18.33■□□□□ 0.52
SIN3B-201ENST00000248054 HELLSQ9NRZ9 838 aa18.33■□□□□ 0.52
SIN3B-201ENST00000248054 DDX19AQ9NUU7 478 aaKnown RBP18.33■□□□□ 0.52
SIN3B-201ENST00000248054 DIP2BQ9P265 1576 aa18.33■□□□□ 0.52
SIN3B-201ENST00000248054 TPTE2Q6XPS3 522 aa18.33■□□□□ 0.52
SIN3B-201ENST00000248054 CATIPQ7Z7H3 387 aa18.33■□□□□ 0.52
SIN3B-201ENST00000248054 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
SIN3B-201ENST00000248054 PDE4BQ07343 736 aa18.32■□□□□ 0.52
SIN3B-201ENST00000248054 CRNKL1Q9BZJ0 848 aaKnown RBP18.32■□□□□ 0.52
SIN3B-201ENST00000248054 ZKSCAN5Q9Y2L8 839 aa18.32■□□□□ 0.52
SIN3B-201ENST00000248054 SMTNL1A8MU46 457 aa18.32■□□□□ 0.52
SIN3B-201ENST00000248054 ZNF444Q8N0Y2 327 aaPredicted RBP18.32■□□□□ 0.52
SIN3B-201ENST00000248054 KLHL34Q8N239 644 aa18.32■□□□□ 0.52
SIN3B-201ENST00000248054 RTCBQ9Y3I0 505 aaKnown RBP18.32■□□□□ 0.52
SIN3B-201ENST00000248054 PLCD3Q8N3E9 789 aa18.31■□□□□ 0.52
SIN3B-201ENST00000248054 CARD10Q9BWT7 1032 aa18.31■□□□□ 0.52
SIN3B-201ENST00000248054 ZSCAN22P10073 491 aaPredicted RBP18.31■□□□□ 0.52
SIN3B-201ENST00000248054 CCDC112Q8NEF3 446 aa18.31■□□□□ 0.52
SIN3B-201ENST00000248054 TERF1P54274 439 aa18.31■□□□□ 0.52
SIN3B-201ENST00000248054 TMEM67Q5HYA8 995 aa18.31■□□□□ 0.52
SIN3B-201ENST00000248054 PDILTQ8N807 584 aa18.31■□□□□ 0.52
SIN3B-201ENST00000248054 ANKRD2Q9GZV1 360 aa18.31■□□□□ 0.52
SIN3B-201ENST00000248054 USP16Q9Y5T5 823 aa18.31■□□□□ 0.52
SIN3B-201ENST00000248054 IGSF3O75054 1194 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 ATP2B2Q01814 1243 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 TNNI3KQ59H18 835 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 MAGEC2Q9UBF1 373 aaPredicted RBP18.3■□□□□ 0.52
SIN3B-201ENST00000248054 FPGT-TNNI3KV9GXZ4 949 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 PREX1Q8TCU6 1659 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 KIF2AO00139 706 aaPredicted RBP18.3■□□□□ 0.52
SIN3B-201ENST00000248054 RANBP6O60518 1105 aaKnown RBP18.3■□□□□ 0.52
SIN3B-201ENST00000248054 ERBB3P21860 1342 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 SH3TC1Q8TE82 1336 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 KIF5BP33176 963 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 TXLNBQ8N3L3 684 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 USP44Q9H0E7 712 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 CCDC171Q6TFL3 1326 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 SUCLG2Q96I99 432 aa18.3■□□□□ 0.52
SIN3B-201ENST00000248054 PNMA6EA0A0J9YXQ4 647 aa18.29■□□□□ 0.52
SIN3B-201ENST00000248054 NBPF7P0C2Y1 421 aaPredicted RBP18.29■□□□□ 0.52
SIN3B-201ENST00000248054 IARSP41252 1262 aaKnown RBP18.29■□□□□ 0.52
SIN3B-201ENST00000248054 UBE2HP62256 183 aa18.29■□□□□ 0.52
SIN3B-201ENST00000248054 MYO6Q9UM54 1294 aa18.29■□□□□ 0.52
SIN3B-201ENST00000248054 PDE8AO60658 829 aa18.29■□□□□ 0.52
SIN3B-201ENST00000248054 ZSCAN29Q8IWY8 852 aaPredicted RBP18.29■□□□□ 0.52
SIN3B-201ENST00000248054 SEC63Q9UGP8 760 aaKnown RBP18.29■□□□□ 0.52
SIN3B-201ENST00000248054 NEURL1BA8MQ27 555 aa18.29■□□□□ 0.52
SIN3B-201ENST00000248054 SPC24Q8NBT2 197 aa18.29■□□□□ 0.52
SIN3B-201ENST00000248054 CREB3L3Q68CJ9 461 aa18.29■□□□□ 0.52
SIN3B-201ENST00000248054 SSH2Q76I76 1423 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 METAP2P50579 478 aaKnown RBP eCLIP18.28■□□□□ 0.52
SIN3B-201ENST00000248054 BEND3Q5T5X7 828 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
SIN3B-201ENST00000248054 CAVIN2O95810 425 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 ZSCAN23Q3MJ62 389 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 SLC9C2Q5TAH2 1124 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 FRMPD1Q5SYB0 1578 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 CCAR1Q8IX12 1150 aaKnown RBP18.28■□□□□ 0.52
SIN3B-201ENST00000248054 BRF1Q92994 677 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 ANO10Q9NW15 660 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 HS1BP3Q53T59 392 aa18.28■□□□□ 0.52
SIN3B-201ENST00000248054 CCDC87Q9NVE4 849 aa18.27■□□□□ 0.52
SIN3B-201ENST00000248054 ORC3Q9UBD5 711 aaPredicted RBP18.27■□□□□ 0.52
SIN3B-201ENST00000248054 WDR17Q8IZU2 1322 aa18.27■□□□□ 0.52
SIN3B-201ENST00000248054 PRIMPOLQ96LW4 560 aa18.27■□□□□ 0.52
SIN3B-201ENST00000248054 C6orf229H3BNL8 230 aa18.27■□□□□ 0.52
SIN3B-201ENST00000248054 RAB3GAP1Q15042 981 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 CCDC12Q8WUD4 166 aaPredicted RBP18.26■□□□□ 0.51
SIN3B-201ENST00000248054 CYP7A1P22680 504 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 CCT2P78371 535 aaKnown RBP18.26■□□□□ 0.51
SIN3B-201ENST00000248054 ESR2Q92731 530 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 VGLL3A8MV65 326 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 KIF20AO95235 890 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 SERPINC1P01008 464 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 RUFY3Q7L099 469 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 SPATA31D1Q6ZQQ2 1576 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 RBM27Q9P2N5 1060 aaKnown RBP18.26■□□□□ 0.51
SIN3B-201ENST00000248054 FBXO3Q9UK99 471 aa18.26■□□□□ 0.51
SIN3B-201ENST00000248054 IBTKQ9P2D0 1353 aaPredicted RBP18.26■□□□□ 0.51
SIN3B-201ENST00000248054 SGSM2O43147 1006 aa18.25■□□□□ 0.51
SIN3B-201ENST00000248054 A1BGP04217 495 aa18.25■□□□□ 0.51
SIN3B-201ENST00000248054 CAGE1Q8TC20 777 aa18.25■□□□□ 0.51
SIN3B-201ENST00000248054 TCIRG1Q13488 830 aa18.25■□□□□ 0.51
SIN3B-201ENST00000248054 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
SIN3B-201ENST00000248054 HAND2P61296 217 aa18.25■□□□□ 0.51
SIN3B-201ENST00000248054 ZNF804AQ7Z570 1209 aa18.25■□□□□ 0.51
SIN3B-201ENST00000248054 OTUD7AQ8TE49 926 aaPredicted RBP18.25■□□□□ 0.51
SIN3B-201ENST00000248054 PYM1Q9BRP8 204 aaKnown RBP18.25■□□□□ 0.51
SIN3B-201ENST00000248054 EPS15P42566 896 aa18.25■□□□□ 0.51
SIN3B-201ENST00000248054 BMP2KQ9NSY1 1161 aaPredicted RBP18.25■□□□□ 0.51
SIN3B-201ENST00000248054 A0A1B0GUL7 405 aa18.24■□□□□ 0.51
SIN3B-201ENST00000248054 NAP1L1P55209 391 aaKnown RBP18.24■□□□□ 0.51
SIN3B-201ENST00000248054 NAA16Q6N069 864 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 157.3 ms