RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 LARGE1O95461 756 aa18.81■□□□□ 0.6
SF3A2-201ENST00000221494 FAM98CQ17RN3 349 aaKnown RBP18.81■□□□□ 0.6
SF3A2-201ENST00000221494 BEND3Q5T5X7 828 aa18.81■□□□□ 0.6
SF3A2-201ENST00000221494 TAF3Q5VWG9 929 aa18.81■□□□□ 0.6
SF3A2-201ENST00000221494 KSR2Q6VAB6 950 aa18.81■□□□□ 0.6
SF3A2-201ENST00000221494 PLA2G4DQ86XP0 818 aa18.81■□□□□ 0.6
SF3A2-201ENST00000221494 CLASRPQ8N2M8 674 aaKnown RBP18.81■□□□□ 0.6
SF3A2-201ENST00000221494 OGFRQ9NZT2 677 aa18.81■□□□□ 0.6
SF3A2-201ENST00000221494 C5P01031 1676 aa18.81■□□□□ 0.6
SF3A2-201ENST00000221494 ATP2B3Q16720 1220 aa18.81■□□□□ 0.6
SF3A2-201ENST00000221494 CGNQ9P2M7 1197 aaKnown RBP18.81■□□□□ 0.6
SF3A2-201ENST00000221494 NAP1L2Q9ULW6 460 aaPredicted RBP18.81■□□□□ 0.6
SF3A2-201ENST00000221494 MYL6BP14649 208 aa18.8■□□□□ 0.6
SF3A2-201ENST00000221494 LARP1BQ659C4 914 aaKnown RBP18.8■□□□□ 0.6
SF3A2-201ENST00000221494 TTC6Q86TZ1 520 aa18.8■□□□□ 0.6
SF3A2-201ENST00000221494 CLSTN2Q9H4D0 955 aa18.8■□□□□ 0.6
SF3A2-201ENST00000221494 WNK3Q9BYP7 1800 aa18.8■□□□□ 0.6
SF3A2-201ENST00000221494 PAPPAQ13219 1627 aa18.8■□□□□ 0.6
SF3A2-201ENST00000221494 PLCB2Q00722 1185 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 GABPB1Q06547 395 aaPredicted RBP18.79■□□□□ 0.6
SF3A2-201ENST00000221494 RNF20Q5VTR2 975 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 TNMDQ9H2S6 317 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 MAP3K2Q9Y2U5 619 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 VPS37CA5D8V6 355 aaPredicted RBP18.79■□□□□ 0.6
SF3A2-201ENST00000221494 ZNF75DP51815 510 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 CBX1P83916 185 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 ST3GAL1Q11201 340 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 AIMP1Q12904 312 aaKnown RBP18.79■□□□□ 0.6
SF3A2-201ENST00000221494 ME3Q16798 604 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 PRDM10Q9NQV6 1147 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 HMG20BQ9P0W2 317 aa18.79■□□□□ 0.6
SF3A2-201ENST00000221494 MYH15Q9Y2K3 1946 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 NBPF26B4DH59 902 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 ALDH1L1O75891 902 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 DDX58O95786 925 aaKnown RBP18.78■□□□□ 0.6
SF3A2-201ENST00000221494 PIP4K2AP48426 406 aaPredicted RBP18.78■□□□□ 0.6
SF3A2-201ENST00000221494 TSGA10IPQ3SY00 556 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 NBPF14Q5TI25 921 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 NBPF10Q6P3W6 841 aaKnown RBP18.78■□□□□ 0.6
SF3A2-201ENST00000221494 SARM1Q6SZW1 724 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 COPS6Q7L5N1 327 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 MPNDQ8N594 471 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 NBPF15Q8N660 670 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 XAGE3Q8WTP9 111 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 TSC1Q92574 1164 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 MAP4K1Q92918 833 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
SF3A2-201ENST00000221494 PTGS1P23219 599 aa18.77■□□□□ 0.6
SF3A2-201ENST00000221494 MEX3CQ5U5Q3 659 aaKnown RBP18.77■□□□□ 0.6
SF3A2-201ENST00000221494 PRPF40BQ6NWY9 871 aaKnown RBP18.77■□□□□ 0.6
SF3A2-201ENST00000221494 CBX8Q9HC52 389 aa18.77■□□□□ 0.6
SF3A2-201ENST00000221494 MAP4K4O95819 1239 aaPredicted RBP18.77■□□□□ 0.59
SF3A2-201ENST00000221494 PTH1RQ03431 593 aa18.77■□□□□ 0.59
SF3A2-201ENST00000221494 SPC24Q8NBT2 197 aa18.77■□□□□ 0.59
SF3A2-201ENST00000221494 SYTL4Q96C24 671 aaPredicted RBP18.77■□□□□ 0.59
SF3A2-201ENST00000221494 BCCIPQ9P287 314 aaKnown RBP eCLIP18.77■□□□□ 0.59
SF3A2-201ENST00000221494 GOLGA6L4A6NEF3 574 aa18.76■□□□□ 0.59
SF3A2-201ENST00000221494 FAM193AP78312 1265 aa18.76■□□□□ 0.59
SF3A2-201ENST00000221494 NCBP1Q09161 790 aaKnown RBP18.76■□□□□ 0.59
SF3A2-201ENST00000221494 CREB3L3Q68CJ9 461 aa18.76■□□□□ 0.59
SF3A2-201ENST00000221494 A1BGP04217 495 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 ADCK5Q3MIX3 580 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 ZSCAN25Q6NSZ9 544 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 JARID2Q92833 1246 aaPredicted RBP18.75■□□□□ 0.59
SF3A2-201ENST00000221494 ARID3AQ99856 593 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 KCND1Q9NSA2 647 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 RBM8AQ9Y5S9 174 aaKnown RBP18.75■□□□□ 0.59
SF3A2-201ENST00000221494 CTAGE5O15320 804 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 LIG1P18858 919 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 CCDC186Q7Z3E2 898 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 SPATA32Q96LK8 384 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 TPCN1Q9ULQ1 816 aa18.75■□□□□ 0.59
SF3A2-201ENST00000221494 AFF2P51816 1311 aa18.74■□□□□ 0.59
SF3A2-201ENST00000221494 ANO6Q4KMQ2 910 aa18.74■□□□□ 0.59
SF3A2-201ENST00000221494 ANKRD13DQ6ZTN6 518 aa18.74■□□□□ 0.59
SF3A2-201ENST00000221494 SLC4A9Q96Q91 983 aa18.74■□□□□ 0.59
SF3A2-201ENST00000221494 TEX13AQ9BXU3 409 aaPredicted RBP18.74■□□□□ 0.59
SF3A2-201ENST00000221494 RFX7Q2KHR2 1363 aa18.74■□□□□ 0.59
SF3A2-201ENST00000221494 IFIT2P09913 472 aaKnown RBP18.73■□□□□ 0.59
SF3A2-201ENST00000221494 OS9Q13438 667 aaPredicted RBP18.73■□□□□ 0.59
SF3A2-201ENST00000221494 KRT32Q14532 448 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 BLOC1S2Q6QNY1 142 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 RIC3Q7Z5B4 369 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 DNAJC10Q8IXB1 793 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 CCDC112Q8NEF3 446 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 LINS1Q8NG48 757 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 LEO1Q8WVC0 666 aaPredicted RBP18.73■□□□□ 0.59
SF3A2-201ENST00000221494 ACSBG1Q96GR2 724 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 MRFAP1L1Q96HT8 127 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 DACT1Q9NYF0 836 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 NBPF7P0C2Y1 421 aaPredicted RBP18.73■□□□□ 0.59
SF3A2-201ENST00000221494 RBM6P78332 1123 aaKnown RBP18.73■□□□□ 0.59
SF3A2-201ENST00000221494 CDC37L1Q7L3B6 337 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 LUZP1Q86V48 1076 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 TRIM5Q9C035 493 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 CTNNA3Q9UI47 895 aa18.73■□□□□ 0.59
SF3A2-201ENST00000221494 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
SF3A2-201ENST00000221494 KIF2AO00139 706 aaPredicted RBP18.72■□□□□ 0.59
SF3A2-201ENST00000221494 SLC27A2O14975 620 aa18.72■□□□□ 0.59
SF3A2-201ENST00000221494 TNNT1P13805 278 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms