RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 A0A087WUU8 490 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 PRSS23O95084 383 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 KITLGP21583 273 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CDK5R1Q15078 307 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CNKSR3Q6P9H4 555 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ADIPOR2Q86V24 386 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 NLGN4YQ8NFZ3 816 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 C22orf15Q8WYQ4 148 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 IGSF21Q96ID5 467 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 PDCD1LG2Q9BQ51 273 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 PIGQQ9BRB3 760 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 KLF16Q9BXK1 252 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 M0QZK8 103 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 GGCTO75223 188 aaKnown RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 IL33O95760 270 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CD14P08571 375 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 C1SP09871 688 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ZNF93P35789 620 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 KCNJ3P48549 501 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ARRB1P49407 418 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 MLC1Q15049 377 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 BTNL8Q6UX41 500 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 FBXL6Q8N531 539 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 AKR1E2Q96JD6 320 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 SGPP1Q9BX95 441 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 OR51I2Q9H344 312 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 AUNIPQ9H7T9 357 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ADAMTS5Q9UNA0 930 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 EVPLQ92817 2033 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 OR6C68A6NDL8 312 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 PHF1O43189 567 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 CD63P08962 238 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 DHPSP49366 369 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 PRDX1Q06830 199 aaKnown RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 EEF1A1P5Q5VTE0 462 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ALKAL1Q6UXT8 129 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 SIGLECL1Q8N7X8 197 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CLEC1AQ8NC01 280 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 OR5AP2Q8NGF4 316 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 KIRREL1Q96J84 757 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 DCBLD2Q96PD2 775 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CCNL2Q96S94 520 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 F5H5K5 113 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 SELENOFO60613 162 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 TRAPPC6AO75865 159 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 SLCO2B1O94956 709 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CBX7O95931 251 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 PDGFBP01127 241 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 TOMM34Q15785 309 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 ZFPM2Q8WW38 1151 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 MED9Q9NWA0 146 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 B4GALT7Q9UBV7 327 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ZNF230Q9UIE0 474 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 DPP4P27487 766 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 RFC3P40938 356 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 HSD17B7P56937 341 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 HNF4GQ14541 408 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 VAMP3Q15836 100 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 ZNF836Q6ZNA1 936 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 OR4C16Q8NGL9 310 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 EMG1Q92979 244 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 RTP3Q9BQQ7 232 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 OR52A1Q9UKL2 312 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 A0A0U1RQS6 177 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 A0A1B0GWA3 101 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 MCRIP1C9JLW8 97 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 TMEM189-UBE2V1I3L0A0 370 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 RAB27BO00194 218 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 RNGTTO60942 597 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 DDAH2O95865 285 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 IGHG1P01857 330 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SPP1P10451 314 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 ELNP15502 786 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 EPHA2P29317 976 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SLC6A1P30531 599 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 CTSCP53634 463 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 OR2G2Q8NGZ5 317 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 NPAS1Q99742 590 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 EPHX3Q9H6B9 360 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 OSGIN2Q9Y236 505 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 MYH14Q7Z406 1995 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 ZNF354AO60765 605 aaPredicted RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 KLF8O95600 359 aaPredicted RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 SNRPNP63162 240 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 ZNF765Q7L2R6 523 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SLC16A13Q7RTY0 426 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 OR5K2Q8NHB8 316 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 INSL6Q9Y581 213 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 V9GYH0 126 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 IGLV3-10A0A075B6K4 115 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 TCAPO15273 167 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 NAT2P11245 290 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 TPPP2P59282 170 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 DCAF7P61962 342 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 ZNF626Q68DY1 528 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 AMIGO3Q86WK7 504 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 OR4C5Q8NGB2 326 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 SMG9Q9H0W8 520 aaKnown RBP8.19□□□□□ -1.1
VCL-206ENST00000623461 CDCP1Q9H5V8 836 aa8.19□□□□□ -1.1
VCL-206ENST00000623461 FTSJ1Q9UET6 329 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms