RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 ZNF607Q96SK3 696 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ZNF426Q9BUY5 554 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 GAL3ST2Q9H3Q3 398 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 KCNE5Q9UJ90 142 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 A4GNTQ9UNA3 340 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 TMED3Q9Y3Q3 217 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 KCNE1BA0A087WTH5 132 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SMIM35A0A1B0GVV1 85 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 NPIPB8E9PQR5 432 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ITGB1BP1O14713 200 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SERPINA5P05154 406 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 CR2P20023 1033 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 BRICD5Q6PL45 260 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 C17orf99Q6UX52 265 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 UBE3DQ7Z6J8 389 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 THOC6Q86W42 341 aaKnown RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 OR1J2Q8NGS2 313 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 OR4C6Q8NH72 309 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SCAMP5Q8TAC9 235 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 DTD2Q96FN9 168 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 INSM2Q96T92 566 aaPredicted RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 CNIH4Q9P003 139 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SLC23A2Q9UGH3 650 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 FOXD3Q9UJU5 478 aaPredicted RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 HS3ST4Q9Y661 456 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 A0A1W2PPQ1 181 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 A6NNC1 897 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 AHRRA9YTQ3 701 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 UMAD1C9J7I0 102 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 M0QZK8 103 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SURF4O15260 269 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BKO60814 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 GGCTO75223 188 aaKnown RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BJP06899 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ALPPL2P10696 532 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ST6GAL1P15907 406 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BOP23527 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 CD1CP29017 333 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BBP33778 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 GRK6P43250 576 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 LPAR6P43657 344 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 RGS8P57771 180 aaPredicted RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BDP58876 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BCP62807 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 NFATC4Q14934 902 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ZBTB6Q15916 424 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST2H2BEQ16778 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ZNF385BQ569K4 471 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 GDF6Q6KF10 455 aaPredicted RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 GID4Q8IVV7 300 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 GALNT16Q8N428 558 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 OR4D11Q8NGI4 311 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 OR6T1Q8NGN1 323 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 GPR148Q8TDV2 347 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 APOBEC4Q8WW27 367 aaKnown RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 ASB17Q8WXJ9 295 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BHQ93079 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 ZBTB8AQ96BR9 441 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 TMEM19Q96HH6 336 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SMIM8Q96KF7 97 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SMIM14Q96QK8 99 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BNQ99877 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 HIST1H2BMQ99879 126 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 COL25A1Q9BXS0 654 aaPredicted RBP7.22□□□□□ -1.25
VPS11-209ENST00000622309 PCED1AQ9H1Q7 454 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 OR51V1Q9H2C8 321 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 CWH43Q9H720 699 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 SLC35D1Q9NTN3 355 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 DECR2Q9NUI1 292 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 TMEM30AQ9NV96 361 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 GNG8Q9UK08 70 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 FLVCR1Q9Y5Y0 555 aa7.22□□□□□ -1.25
VPS11-209ENST00000622309 PIKFYVEQ9Y2I7 2098 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 SLC5A10A0PJK1 596 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 EEF1E1-BLOC1S5C9J1V9 151 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 C9J4A7 227 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 K7ERQ8 282 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 PTGESO14684 152 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 XRCC3O43542 346 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 OR1F1O43749 312 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 RAMP2O60895 175 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 SLC2A10O95528 541 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 FCGR3AP08637 254 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 GSTP1P09211 210 aaKnown RBP7.21□□□□□ -1.25
VPS11-209ENST00000622309 DMWDQ09019 674 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 JOSD1Q15040 202 aaPredicted RBP7.21□□□□□ -1.25
VPS11-209ENST00000622309 MOGAT2Q3SYC2 334 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 ZNF697Q5TEC3 545 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 GRHL2Q6ISB3 625 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 CAMKMTQ7Z624 323 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 MRGPREQ86SM8 312 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 SLC38A5Q8WUX1 472 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 OR5B2Q96R09 309 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 ACTRT3Q9BYD9 372 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 POTEKPQ9BYX7 375 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 EIF5A2Q9GZV4 153 aaKnown RBP7.21□□□□□ -1.25
VPS11-209ENST00000622309 SYNPO2LQ9H987 977 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 CHRNA9Q9UGM1 479 aa7.21□□□□□ -1.25
VPS11-209ENST00000622309 TTC3P53804 2025 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms