RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 ATRXP46100 2492 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 MBD3L4A6NDZ8 208 aaPredicted RBP9.98□□□□□ -0.81
VMP1-207ENST00000588131 MBD3L3A6NE82 208 aaPredicted RBP9.98□□□□□ -0.81
VMP1-207ENST00000588131 MBD3L5A6NJ08 208 aaPredicted RBP9.98□□□□□ -0.81
VMP1-207ENST00000588131 FIGNL2A6NMB9 653 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 DHHO43323 396 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 TOXO94900 526 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 LCKP06239 509 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 NR2C1P13056 603 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 EDN3P14138 238 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 GABRA1P14867 456 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 LAP3P28838 519 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 CDAP32320 146 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 ALDH3B2P48448 385 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 SIRPAP78324 504 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 ZNF85Q03923 595 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 HSF2Q03933 536 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 GLO1Q04760 184 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 TBCEQ15813 527 aaPredicted RBP9.98□□□□□ -0.81
VMP1-207ENST00000588131 RNLSQ5VYX0 342 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 C3P1Q6ZMU1 363 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 SSX6Q7RTT6 188 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 SLC16A9Q7RTY1 509 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 LHFPL3Q86UP9 236 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 CDC20BQ86Y33 519 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 DOLPP1Q86YN1 238 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 GLB1L2Q8IW92 636 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 GPR137CQ8N3F9 429 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 SVOPQ8N4V2 548 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 ACBD7Q8N6N7 88 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 NANOGP1Q8N7R0 232 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 OR6N2Q8NGY6 317 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 MBD3L2Q8NHZ7 208 aaPredicted RBP9.98□□□□□ -0.81
VMP1-207ENST00000588131 C11orf40Q8WZ69 217 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 INTS14Q96SY0 518 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 TTTY10Q9BZA0 68 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 LINC00470Q9BZP3 86 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 SLCO5A1Q9H2Y9 848 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 C12orf49Q9H741 205 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 GLRX2Q9NS18 164 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 SLC7A10Q9NS82 523 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 PARPBPQ9NWS1 579 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 ERVK13-1Q9NX77 482 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 PRSS50Q9UI38 385 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 ZNF835Q9Y2P0 537 aa9.98□□□□□ -0.81
VMP1-207ENST00000588131 EXOSC1Q9Y3B2 195 aaKnown RBP9.98□□□□□ -0.81
VMP1-207ENST00000588131 A0A1W2PQL4 384 aaPredicted RBP9.97□□□□□ -0.81
VMP1-207ENST00000588131 DAPL1A0PJW8 107 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 PRR32B1ATL7 298 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 PRRG2O14669 202 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 SLC19A2O60779 497 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 INMTO95050 263 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 SPARCP09486 303 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 OR2T7P0C7T2 308 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 JUNBP17275 347 aaPredicted RBP9.97□□□□□ -0.81
VMP1-207ENST00000588131 MYL12AP19105 171 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 PTGER4P35408 488 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 ENTPD1P49961 510 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 BLVRAP53004 296 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 GP2P55259 537 aaKnown RBP9.97□□□□□ -0.81
VMP1-207ENST00000588131 ACTC1P68032 377 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 ACTA1P68133 377 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 ADAM8P78325 824 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 FOXF2Q12947 444 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 NFATC3Q12968 1075 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 SF3B4Q15427 424 aaKnown RBP eCLIP9.97□□□□□ -0.81
VMP1-207ENST00000588131 OR2G6Q5TZ20 316 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 VWA1Q6PCB0 445 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 FOXL2NBQ6ZUU3 175 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 FAM214BQ7L5A3 538 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 OR2T27Q8NH04 317 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 CPT1CQ8TCG5 803 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 MUL1Q969V5 352 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 NABP1Q96AH0 204 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 TMIGD2Q96BF3 282 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 APH1AQ96BI3 265 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 WBP1Q96G27 269 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 OR5M11Q96RB7 305 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 AMELYQ99218 206 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 TM9SF2Q99805 663 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 ALG8Q9BVK2 526 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 RBM24Q9BX46 236 aaKnown RBP9.97□□□□□ -0.81
VMP1-207ENST00000588131 SEC61A2Q9H9S3 476 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 CRLF2Q9HC73 371 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 GPR35Q9HC97 309 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 EMC7Q9NPA0 242 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 KCNG2Q9UJ96 466 aa9.97□□□□□ -0.81
VMP1-207ENST00000588131 LSM2Q9Y333 95 aaKnown RBP9.97□□□□□ -0.81
VMP1-207ENST00000588131 ARHGAP21Q5T5U3 1957 aa9.96□□□□□ -0.81
VMP1-207ENST00000588131 TMEM129A0AVI4 362 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 ZNF593O00488 134 aaPredicted RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 MYL12BO14950 172 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 MAGEB4O15481 346 aaPredicted RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 SEC14L2O76054 403 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 WNT11O96014 354 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 KIR2DL2P43627 348 aaPredicted RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 RPL5P46777 297 aaKnown RBP9.96□□□□□ -0.82
VMP1-207ENST00000588131 OR3A2P47893 321 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 NR1H2P55055 460 aa9.96□□□□□ -0.82
VMP1-207ENST00000588131 FOXG1P55316 489 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms