RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 MTX3Q5HYI7 312 aa17.52■□□□□ 0.4
VAT1-203ENST00000587062 GPR139Q6DWJ6 353 aa17.52■□□□□ 0.4
VAT1-203ENST00000587062 IGFN1Q86VF2 1251 aa17.52■□□□□ 0.4
VAT1-203ENST00000587062 OR10H5Q8NGA6 315 aa17.52■□□□□ 0.4
VAT1-203ENST00000587062 FAM46AQ96IP4 442 aaKnown RBP17.52■□□□□ 0.4
VAT1-203ENST00000587062 WACQ9BTA9 647 aa17.52■□□□□ 0.4
VAT1-203ENST00000587062 MUC13Q9H3R2 512 aa17.52■□□□□ 0.4
VAT1-203ENST00000587062 V9GYQ6 96 aa17.52■□□□□ 0.4
VAT1-203ENST00000587062 SLC2A10O95528 541 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 PATE4P0C8F1 98 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 ERVK-25P63136 954 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 LSM11P83369 360 aaKnown RBP eCLIP17.51■□□□□ 0.39
VAT1-203ENST00000587062 VLDLRP98155 873 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 FAM27BQ5VT28 67 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 SLC25A47Q6Q0C1 308 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 FITM2Q8N6M3 262 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 ZNF525Q8N782 197 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 LRRC75AQ8NAA5 344 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 OR52J3Q8NH60 311 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 HTRA1Q92743 480 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 MRPL24Q96A35 216 aaKnown RBP17.51■□□□□ 0.39
VAT1-203ENST00000587062 ZNF570Q96NI8 536 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 TSPAN32Q96QS1 320 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 DOK1Q99704 481 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 PIMREGQ9BSJ6 248 aa17.51■□□□□ 0.39
VAT1-203ENST00000587062 EIF3KQ9UBQ5 218 aaKnown RBP17.51■□□□□ 0.39
VAT1-203ENST00000587062 LOC390937A0A1W2PQ73 354 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 SH3PXD2BA1X283 911 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 RPS6KA3P51812 740 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 MOGQ16653 247 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 RGS7BPQ6MZT1 257 aaPredicted RBP17.5■□□□□ 0.39
VAT1-203ENST00000587062 MEX3DQ86XN8 651 aaKnown RBP17.5■□□□□ 0.39
VAT1-203ENST00000587062 C1orf174Q8IYL3 243 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 SVOPLQ8N434 492 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 ZNF519Q8TB69 540 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 SORCS2Q96PQ0 1159 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 BCL2L14Q9BZR8 327 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 IL1RAPQ9NPH3 570 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 ACTR3BQ9P1U1 418 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 C2CD3Q4AC94 2353 aa17.5■□□□□ 0.39
VAT1-203ENST00000587062 A0A1W2PPL8 197 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 UNC119BA6NIH7 251 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 C12orf71A8MTZ7 269 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 M0R233 179 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 CDC42EP2O14613 210 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 SYNGR3O43761 229 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 KRT36O76013 467 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 DIRAS1O95057 198 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 SNAP29O95721 258 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 CST2P09228 141 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 CDAP32320 146 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 MSX2P35548 267 aaPredicted RBP17.49■□□□□ 0.39
VAT1-203ENST00000587062 FMODQ06828 376 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 CARTPTQ16568 116 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 ARL9Q6T311 187 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 TSEN54Q7Z6J9 526 aaKnown RBP17.49■□□□□ 0.39
VAT1-203ENST00000587062 ZDHHC21Q8IVQ6 265 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 LINC00471Q8N535 108 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 FAM86B1Q8N7N1 296 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 FGFBP3Q8TAT2 258 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 C11orf40Q8WZ69 217 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 RSRC1Q96IZ7 334 aaKnown RBP17.49■□□□□ 0.39
VAT1-203ENST00000587062 DHRS1Q96LJ7 313 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 SIGLEC7Q9Y286 467 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 TIMM10BQ9Y5J6 103 aa17.49■□□□□ 0.39
VAT1-203ENST00000587062 IGHV4-30-2A0A087WSY4 118 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 TRBV4-1A0A0J9YWV2 114 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 TLX2O43763 284 aaPredicted RBP17.48■□□□□ 0.39
VAT1-203ENST00000587062 OR10H3O60404 316 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 LCKP06239 509 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 MSR1P21757 451 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 PCSK6P29122 969 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 SDHAP31040 664 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 OMPP47874 163 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 LOXL1Q08397 574 aaPredicted RBP17.48■□□□□ 0.39
VAT1-203ENST00000587062 DPY19L2P2Q6ZN68 376 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 SYT9Q86SS6 491 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 ADCK1Q86TW2 530 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 ZNF584Q8IVC4 421 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 C10orf105Q8TEF2 133 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 NMD3Q96D46 503 aaKnown RBP17.48■□□□□ 0.39
VAT1-203ENST00000587062 REV1Q9UBZ9 1251 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 DUSP13Q9UII6 198 aa17.48■□□□□ 0.39
VAT1-203ENST00000587062 A0A1W2PPW3 197 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 PRSS37A4D1T9 235 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 PTP4A3O75365 173 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 MT-ND5P03915 603 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 ADRA2AP08913 450 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 MMP7P09237 267 aaPredicted RBP17.47■□□□□ 0.39
VAT1-203ENST00000587062 ZNF32P17041 273 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 FUT4P22083 530 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 USF1P22415 310 aaPredicted RBP17.47■□□□□ 0.39
VAT1-203ENST00000587062 CCNOP22674 350 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 STOMP27105 288 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 RRM2P31350 389 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 GDI2P50395 445 aaKnown RBP17.47■□□□□ 0.39
VAT1-203ENST00000587062 FHL1Q13642 323 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 PABPC1L2AQ5JQF8 200 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 DNM1P34Q6PK57 102 aa17.47■□□□□ 0.39
VAT1-203ENST00000587062 SMARCD3Q6STE5 483 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms