RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 SLC26A1Q9H2B4 701 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 C5orf66Q9H5L9 145 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 VIPAS39Q9H9C1 493 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 CALHM2Q9HA72 323 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 CYP3A43Q9HB55 503 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 RPRD1BQ9NQG5 326 aaKnown RBP1.98□□□□□ -2.09
VAPA-208ENST00000584796 DDIT4Q9NX09 232 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 PLEK2Q9NYT0 353 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 ABCD2Q9UBJ2 740 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 CRLS1Q9UJA2 301 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 MRTO4Q9UKD2 239 aaKnown RBP1.98□□□□□ -2.09
VAPA-208ENST00000584796 FARSAQ9Y285 508 aaKnown RBP1.98□□□□□ -2.09
VAPA-208ENST00000584796 SLC17A4Q9Y2C5 497 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 PCLOQ9Y6V0 5065 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 NINQ8N4C6 2090 aa1.98□□□□□ -2.09
VAPA-208ENST00000584796 IGHV3-16A0A0C4DH30 117 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 A0A1B0GUH1 482 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 RNF222A6NCQ9 220 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 C21orf140B9A014 251 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 NPIPA2E9PIF3 369 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 H3BMH7 237 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 WRBO00258 174 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 ARPC3O15145 178 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 POLR2DO15514 142 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 SLC19A2O60779 497 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CLDN11O75508 207 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 SCRG1O75711 98 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 SCGNO76038 276 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 TOXO94900 526 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 TXNDC12O95881 172 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 MBD3O95983 291 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 PAHP00439 452 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 KRT14P02533 472 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 S100A9P06702 114 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 PNMTP11086 282 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 RALBP11234 206 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 NELFEP18615 380 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 HNF1AP20823 631 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CD9P21926 228 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 DUTP33316 252 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 ELK3P41970 407 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 GRIA1P42261 906 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 SSR1P43307 286 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 ACADSBP45954 432 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CCR4P51679 360 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 HERVK_113P63132 956 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 ERVK-8P63133 956 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 MFGE8Q08431 387 aaPredicted RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 GPR50Q13585 617 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CEACAM7Q14002 265 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 MEF2DQ14814 521 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 NCF4Q15080 339 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 SIX1Q15475 284 aaPredicted RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 KNOP1Q1ED39 458 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 HKDC1Q2TB90 917 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 DEFB110Q30KQ9 67 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 PTPN20Q4JDL3 420 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 TAF3Q5VWG9 929 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 LIPJQ5W064 366 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CARD17Q5XLA6 110 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 TMEM225Q6GV28 225 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 RTL6Q6ICC9 239 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CAPN13Q6MZZ7 669 aaPredicted RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 WDR74Q6RFH5 385 aaPredicted RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 CLEC2AQ6UVW9 174 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 IGFL2Q6UWQ7 119 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 WASH2PQ6VEQ5 465 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 SYT10Q6XYQ8 523 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 Q6ZPB1 254 aaPredicted RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 COX15Q7KZN9 410 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 TRPM8Q7Z2W7 1104 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 GOLGA7Q7Z5G4 137 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 LHFPL4Q7Z7J7 247 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 PAQR7Q86WK9 346 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CCDC65Q8IXS2 484 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 RCOR2Q8IZ40 523 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 SLC22A15Q8IZD6 547 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CCDC185Q8N715 623 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 ANKFN1Q8N957 763 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CCDC112Q8NEF3 446 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 OR4C15Q8NGM1 316 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 OR10G6Q8NH81 332 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 RAB3IL1Q8TBN0 382 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 SLC22A8Q8TCC7 542 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 DNAJA4Q8WW22 397 aaPredicted RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 SPRYD4Q8WW59 207 aaPredicted RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 TMEM37Q8WXS4 190 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 PSMF1Q92530 271 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 PEX13Q92968 403 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 NUS1Q96E22 293 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 MRPL53Q96EL3 112 aaKnown RBP1.97□□□□□ -2.09
VAPA-208ENST00000584796 PPP1R16AQ96I34 528 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CXorf58Q96LI9 332 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 OR2M4Q96R27 311 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 NPY6RQ99463 290 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 NPAS2Q99743 824 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 AGPAT1Q99943 283 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 CCM2Q9BSQ5 444 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 ERVK-6Q9BXR3 956 aa1.97□□□□□ -2.09
VAPA-208ENST00000584796 GSDMCQ9BYG8 508 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms