RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 BGNP21810 368 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 TNFSF4P23510 183 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 CPT2P23786 658 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 STOMP27105 288 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 PCGF2P35227 344 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 POLR2JP52435 117 aaKnown RBP11.28□□□□□ -0.6
COPS3-218ENST00000584216 CDH12P55289 794 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 THEM4Q5T1C6 240 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 GCNT6Q5T4J0 391 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 HHATQ5VTY9 493 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 ZNF613Q6PF04 617 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 BTNL3Q6UXE8 466 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 HIST3H2AQ7L7L0 130 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 BCL6BQ8N143 479 aaPredicted RBP11.28□□□□□ -0.6
COPS3-218ENST00000584216 OR4F5Q8NH21 305 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 NFKBIDQ8NI38 313 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 IPCEF1Q8WWN9 437 aaPredicted RBP11.28□□□□□ -0.6
COPS3-218ENST00000584216 HIST1H2ACQ93077 130 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 MARS2Q96GW9 593 aaKnown RBP11.28□□□□□ -0.6
COPS3-218ENST00000584216 CCT8L2Q96SF2 557 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 WDR55Q9H6Y2 383 aaPredicted RBP11.28□□□□□ -0.6
COPS3-218ENST00000584216 PATZ1Q9HBE1 687 aaKnown RBP11.28□□□□□ -0.6
COPS3-218ENST00000584216 NANSQ9NR45 359 aa11.28□□□□□ -0.6
COPS3-218ENST00000584216 ZSCAN5BA6NJL1 495 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 MCIDASD6RGH6 385 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 TRAPPC2LH3BP13 241 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 CHP2O43745 196 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 FMO6PO60774 539 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 NR2C1P13056 603 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 TNFRSF1AP19438 455 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 PPIBP23284 216 aaKnown RBP11.27□□□□□ -0.61
COPS3-218ENST00000584216 SLC6A9P48067 706 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 GDI2P50395 445 aaKnown RBP11.27□□□□□ -0.61
COPS3-218ENST00000584216 TNFAIP6P98066 277 aaPredicted RBP11.27□□□□□ -0.61
COPS3-218ENST00000584216 CDK6Q00534 326 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 MELKQ14680 651 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 PABPC1L2AQ5JQF8 200 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 SPATA46Q5T0L3 261 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 ARL9Q6T311 187 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 MUC20Q8N307 709 aaPredicted RBP11.27□□□□□ -0.61
COPS3-218ENST00000584216 PARP8Q8N3A8 854 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 LRRC18Q8N456 261 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 KLF14Q8TD94 323 aaPredicted RBP11.27□□□□□ -0.61
COPS3-218ENST00000584216 WFDC12Q8WWY7 111 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 MCHR2Q969V1 340 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 DCLRE1CQ96SD1 692 aaKnown RBP11.27□□□□□ -0.61
COPS3-218ENST00000584216 NANOGQ9H9S0 305 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 SIAEQ9HAT2 523 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 NPHS2Q9NP85 383 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 SLCO1B3Q9NPD5 702 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 SDR39U1Q9NRG7 319 aaPredicted RBP11.27□□□□□ -0.61
COPS3-218ENST00000584216 TMEM106BQ9NUM4 274 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 STX18Q9P2W9 335 aaKnown RBP11.27□□□□□ -0.61
COPS3-218ENST00000584216 EGFL7Q9UHF1 273 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 ZNF229Q9UJW7 825 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 LRCH1Q9Y2L9 728 aa11.27□□□□□ -0.61
COPS3-218ENST00000584216 A0A1W2PRG6 482 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 C5orf49A4QMS7 147 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 GMNCA6NCL1 334 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 RGS16O15492 202 aaPredicted RBP11.26□□□□□ -0.61
COPS3-218ENST00000584216 TGDSO95455 350 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 MMP7P09237 267 aaPredicted RBP11.26□□□□□ -0.61
COPS3-218ENST00000584216 SLC6A2P23975 617 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 MPV17P39210 176 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 ARHGDIAP52565 204 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 BTG1P62324 171 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 BST1Q10588 318 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 ZNF74Q16587 644 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 HIST3H3Q16695 136 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 FAM205BPQ63HN1 556 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 TTC33Q6PID6 262 aaPredicted RBP11.26□□□□□ -0.61
COPS3-218ENST00000584216 BRICD5Q6PL45 260 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 LRRN1Q6UXK5 716 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 COMTD1Q86VU5 262 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 LRRC28Q86X40 367 aaPredicted RBP11.26□□□□□ -0.61
COPS3-218ENST00000584216 ARMC8Q8IUR7 673 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 ALDH16A1Q8IZ83 802 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 ZNF101Q8IZC7 436 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 NOXO1Q8NFA2 376 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 SLC25A40Q8TBP6 338 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 GEMIN6Q8WXD5 167 aaKnown RBP11.26□□□□□ -0.61
COPS3-218ENST00000584216 GTF2H4Q92759 462 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 UBE2FQ969M7 185 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 THOC1Q96FV9 657 aaKnown RBP11.26□□□□□ -0.61
COPS3-218ENST00000584216 TMEM109Q9BVC6 243 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 OR2J1Q9GZK6 312 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 PAIP1Q9H074 479 aaKnown RBP11.26□□□□□ -0.61
COPS3-218ENST00000584216 ELOVL3Q9HB03 270 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 TAS2R5Q9NYW4 299 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 CORO2BQ9UQ03 480 aa11.26□□□□□ -0.61
COPS3-218ENST00000584216 UBDO15205 165 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 SURF4O15260 269 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 TIMM8AO60220 97 aaPredicted RBP11.25□□□□□ -0.61
COPS3-218ENST00000584216 TPST1O60507 370 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 GPANK1O95872 356 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 CH25HO95992 272 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 UMPSP11172 480 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 OMGP23515 440 aa11.25□□□□□ -0.61
COPS3-218ENST00000584216 MDH2P40926 338 aaKnown RBP11.25□□□□□ -0.61
COPS3-218ENST00000584216 DAP3P51398 398 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms