RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 ZNF282Q9UDV7 671 aaPredicted RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 GAGE2DQ9UEU5 116 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 PHF11Q9UIL8 331 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 RNF150Q9ULK6 438 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 MGAT4BQ9UQ53 548 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 RPL36Q9Y3U8 105 aaKnown RBP3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 ENPP4Q9Y6X5 453 aa3.37□□□□□ -1.87
SMCHD1-208ENST00000583344 CCL15-CCL14A0A0B4J2E2 113 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TRBV2A0A0J9YWF9 115 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 GLYATL1P3A0A0U1RQE8 302 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 A0A1W2PQ67 120 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 A0A1W2PRB8 838 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 IRGMA1A4Y4 181 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 MTMR11A4FU01 709 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 C5orf51A6NDU8 294 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF840PA6NDX5 716 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CCDC182A6NF36 153 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 FABP12A6NFH5 140 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 HEPACAM2A8MVW5 462 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 FOXE1O00358 373 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 POLR1CO15160 346 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 HCN1O60741 890 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TBX19O60806 448 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 FCGR3BO75015 233 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CCNB2O95067 398 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 GADD45GO95257 159 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CPSF4O95639 269 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TGFAP01135 160 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 C1QCP02747 245 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 ADRA2AP08913 450 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CSF3P09919 207 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SPP1P10451 314 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 LAMP1P11279 417 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 IL7P13232 177 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 AREGP15514 252 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 RPS2P15880 293 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 MAGP20916 626 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 GALP22466 123 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CD52P31358 61 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TIA1P31483 386 aaKnown RBP eCLIP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CCR7P32248 378 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SPAM1P38567 509 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 OR3A3P47888 321 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC9A3P48764 834 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TUFMP49411 452 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 UCP2P55851 309 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SMIM11AP58511 58 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 BTG1P62324 171 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 RPS24P62847 133 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 FKBP1BP68106 108 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 BCL2L1Q07817 233 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 FCHO2Q0JRZ9 810 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 ELAVL2Q12926 359 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CHIT1Q13231 466 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 PDE7AQ13946 482 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 MELKQ14680 651 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CCL15Q16663 113 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 ZNF630Q2M218 657 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 EXOC3L2Q2M3D2 409 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CCDC58Q4VC31 144 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 LBHQ53QV2 105 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SPIN4Q56A73 249 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 GCNT6Q5T4J0 391 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CPTPQ5TA50 214 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CD200R1LQ6Q8B3 271 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 FAM198BQ6UWH4 519 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 NHLRC1Q6VVB1 395 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 Q6ZPB1 254 aaPredicted RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 ANKRD46Q86W74 232 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 BBS7Q8IWZ6 715 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 PHC2Q8IXK0 858 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CFAP206Q8IYR0 622 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CLECL1Q8IZS7 167 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 Q8N377 158 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 LINC00471Q8N535 108 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CLDN19Q8N6F1 224 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 OR8J1Q8NGP2 316 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 CLHC1Q8NHS4 586 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 GPR151Q8TDV0 419 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 APOBEC4Q8WW27 367 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 GEMIN6Q8WXD5 167 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SLC25A46Q96AG3 418 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 MOB3AQ96BX8 217 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 SNRNP40Q96DI7 357 aaKnown RBP3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 WDR34Q96EX3 536 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 PDXPQ96GD0 296 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TPD52L3Q96J77 140 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 TXN2Q99757 166 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 COQ7Q99807 217 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 P2RY13Q9BPV8 354 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 KCNS3Q9BQ31 491 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 MARVELD1Q9BSK0 173 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 MND1Q9BWT6 205 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 UCK2Q9BZX2 261 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 MIXL1Q9H2W2 232 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 REEP4Q9H6H4 257 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 AMBNQ9NP70 447 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 A4GALTQ9NPC4 353 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 NGBQ9NPG2 151 aa3.36□□□□□ -1.87
SMCHD1-208ENST00000583344 NDUFB11Q9NX14 153 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms