RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TRAV39A0A0B4J263 110 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF816-ZNF321PA0A0X1KG74 233 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 C9JVG2 144 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 EEDO75530 441 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 AIFM1O95831 613 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 NAA10P41227 235 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 UBE2AP49459 152 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 HERVK_113P61574 105 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 LRRC63Q05C16 580 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 LY6G6FQ5SQ64 297 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 CCNJQ5T5M9 372 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 CARD17Q5XLA6 110 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 LRRC66Q68CR7 880 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 OR52W1Q6IF63 320 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 LINC01551Q86U37 167 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 PCP2Q8IVA1 136 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 MMAAQ8IVH4 418 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 BBS5Q8N3I7 341 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 STPG2Q8N412 459 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF596Q8TC21 504 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 ZFP90Q8TF47 636 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 FAM3DQ96BQ1 224 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 TSNARE1Q96NA8 513 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 MRPL37Q9BZE1 423 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 TPK1Q9H3S4 243 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 KCNJ16Q9NPI9 418 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 DCAF16Q9NXF7 216 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 GOLT1BQ9Y3E0 138 aa2.95□□□□□ -1.94
SMCHD1-205ENST00000581383 SPECC1L-ADORA2AF8WAN1 911 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 MRPS12O15235 138 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 SNAI2O43623 268 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 HMMRO75330 724 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 FTH1P02794 183 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 SERPINA5P05154 406 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 GNAO1P09471 354 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 PRPS2P11908 318 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 OMGP23515 440 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 AQP2P41181 271 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 TNNT2P45379 298 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 CYB561P49447 251 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 PPOXP50336 477 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 CUL2Q13617 745 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 IDI1Q13907 227 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 KCTD19Q17RG1 926 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 SOHLH1Q5JUK2 328 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 PPM1LQ5SGD2 360 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 HES5Q5TA89 166 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 SPECC1LQ69YQ0 1117 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 ZFP2Q6ZN57 461 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 NCCRP1Q6ZVX7 275 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 OAFQ86UD1 273 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 BMFQ96LC9 184 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF578Q96N58 590 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 SERPINB12Q96P63 405 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 RACGAP1Q9H0H5 632 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 ZNF629Q9UEG4 869 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 RAB26Q9ULW5 256 aa2.94□□□□□ -1.94
SMCHD1-205ENST00000581383 IGLV4-69A0A075B6H9 119 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 GLYATL1P3A0A0U1RQE8 302 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 ANGPTL7O43827 346 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 DPM1O60762 260 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 CLPXO76031 633 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 AGTP01019 485 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 FABP3P05413 133 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 FOXN2P32314 431 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 MAS1LP35410 378 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 CDKN2BP42772 138 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 ALKBH6Q3KRA9 238 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 C9orf135Q5VTT2 229 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 ANKRD22Q5VYY1 191 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 METAP1DQ6UB28 335 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 ABHD13Q7L211 337 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 OR4S2Q8NH73 311 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 STARD8Q92502 1023 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 SLC38A4Q969I6 547 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 WFIKKN1Q96NZ8 548 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 OR5B12Q96R08 314 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 C20orf24Q9BUV8 137 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 SLC17A9Q9BYT1 436 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 VCXQ9H320 206 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 NEK6Q9HC98 313 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 SLC40A1Q9NP59 571 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 UXTQ9UBK9 157 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 TBX21Q9UL17 535 aa2.93□□□□□ -1.94
SMCHD1-205ENST00000581383 COL4A4P53420 1690 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 NINLQ9Y2I6 1382 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 TCP11X1B4DZS4 312 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 H0YHG0 523 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 EIF3HO15372 352 aaKnown RBP eCLIP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 SPAG7O75391 227 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 SRP72O76094 671 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 PRB2P02812 416 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 MAGP20916 626 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 LONP1P36776 959 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 RPS9P46781 194 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 ADARB1P78563 741 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 SLC25A11Q02978 314 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 TCP10Q12799 353 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 CHRNA6Q15825 494 aa2.92□□□□□ -1.94
SMCHD1-205ENST00000581383 POU2AF1Q16633 256 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms