RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 IGKV1D-43A0A0B4J1Z2 117 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 A0A1W2PQM1 296 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 H3BML4 177 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 GDF9O60383 454 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 ITGA5P08648 1049 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 HTR2BP41595 481 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 RASGEF1BQ0VAM2 473 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 NKAIN1Q4KMZ8 207 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 WDR45BQ5MNZ6 344 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 LCN10Q6JVE6 187 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 SLC18B1Q6NT16 456 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 TMEM71Q6P5X7 295 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 PLPP7Q8NBV4 271 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 NFAM1Q8NET5 270 aaPredicted RBP15.77■□□□□ 0.12
ERBB2-205ENST00000578199 OR56B4Q8NH76 319 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 NXPE2Q96DL1 559 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 HYLS1Q96M11 299 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 AKIRIN1Q9H9L7 192 aaPredicted RBP15.77■□□□□ 0.12
ERBB2-205ENST00000578199 MED29Q9NX70 200 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 STMN3Q9NZ72 180 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 VSX1Q9NZR4 365 aaPredicted RBP15.77■□□□□ 0.12
ERBB2-205ENST00000578199 KIF26BQ2KJY2 2108 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 TMEM200CA6NKL6 621 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 FTCDNL1E5RQL4 147 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 TNFRSF10AO00220 468 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 GPR171O14626 319 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 INPP5JQ15735 1006 aaPredicted RBP15.77■□□□□ 0.12
ERBB2-205ENST00000578199 CD276Q5ZPR3 534 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 LYPD8Q6UX82 237 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 Q6ZTK2 550 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 KMT5CQ86Y97 462 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 LINC00346Q8IVM7 164 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 SHDQ96IW2 340 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 MNTQ99583 582 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 GAL3ST1Q99999 423 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 PLEKHA1Q9HB21 404 aa15.77■□□□□ 0.12
ERBB2-205ENST00000578199 MED12Q93074 2177 aa15.77■□□□□ 0.11
ERBB2-205ENST00000578199 TRBV11-1A0A0K0K1C0 115 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 MEIS3P1A6NDR6 274 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 SCRG1O75711 98 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 RAB40ALP0C0E4 278 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 IFNGR1P15260 489 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 CSRP1P21291 193 aaKnown RBP15.76■□□□□ 0.11
ERBB2-205ENST00000578199 C19orf57Q0VDD7 668 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 YOD1Q5VVQ6 348 aaPredicted RBP15.76■□□□□ 0.11
ERBB2-205ENST00000578199 NDUFAF7Q7L592 441 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 ZNF431Q8TF32 576 aaPredicted RBP15.76■□□□□ 0.11
ERBB2-205ENST00000578199 RAB40AQ8WXH6 277 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 C7orf50Q9BRJ6 194 aaKnown RBP15.76■□□□□ 0.11
ERBB2-205ENST00000578199 APMAPQ9HDC9 416 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 STEAP1Q9UHE8 339 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 ING4Q9UNL4 249 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 LRP12Q9Y561 859 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 ARPC1BO15143 372 aaKnown RBP15.76■□□□□ 0.11
ERBB2-205ENST00000578199 PSMB1P20618 241 aaKnown RBP15.76■□□□□ 0.11
ERBB2-205ENST00000578199 DHPSP49366 369 aaPredicted RBP15.76■□□□□ 0.11
ERBB2-205ENST00000578199 ARRB1P49407 418 aaPredicted RBP15.76■□□□□ 0.11
ERBB2-205ENST00000578199 SLC26A5P58743 744 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 ZP1P60852 638 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 CCL7P80098 99 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 IQCF2Q8IXL9 164 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 RNF128Q8TEB7 428 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 HLA-CQ95604 372 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 EMC6Q9BV81 110 aa15.76■□□□□ 0.11
ERBB2-205ENST00000578199 ANKRD20A5PA0PJZ0 165 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 CENPBD1B2RD01 187 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 ERVH48-1M5A8F1 160 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 PHYHO14832 338 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 KDM4BO94953 1096 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 RAF1P04049 648 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 ANXA3P12429 323 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 FOXK1P85037 733 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 GUCA2AQ02747 115 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 PUDPQ08623 228 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 LINC00303Q3SY05 128 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 PAPD4Q6PIY7 484 aaKnown RBP15.75■□□□□ 0.11
ERBB2-205ENST00000578199 CORO6Q6QEF8 472 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 ZNF227Q86WZ6 799 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 OR5M1Q8NGP8 315 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 SEC22CQ9BRL7 303 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 TGIF2Q9GZN2 237 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 MYEF2Q9P2K5 600 aaKnown RBP15.75■□□□□ 0.11
ERBB2-205ENST00000578199 TMA7Q9Y2S6 64 aaKnown RBP15.75■□□□□ 0.11
ERBB2-205ENST00000578199 ALOX12BO75342 701 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 PEX14O75381 377 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 TOXO94900 526 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 RAD52P43351 418 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 SELENOPP49908 381 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 TEX30Q5JUR7 227 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 STK35Q8TDR2 534 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 EMC7Q9NPA0 242 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 MRPL39Q9NYK5 338 aaKnown RBP15.75■□□□□ 0.11
ERBB2-205ENST00000578199 SRPK3Q9UPE1 567 aa15.75■□□□□ 0.11
ERBB2-205ENST00000578199 OR2T1O43869 369 aa15.74■□□□□ 0.11
ERBB2-205ENST00000578199 EFNA2O43921 213 aa15.74■□□□□ 0.11
ERBB2-205ENST00000578199 ZNF432O94892 652 aa15.74■□□□□ 0.11
ERBB2-205ENST00000578199 ECDO95905 644 aaPredicted RBP15.74■□□□□ 0.11
ERBB2-205ENST00000578199 POU3F4P49335 361 aa15.74■□□□□ 0.11
ERBB2-205ENST00000578199 POU3F1Q03052 451 aaPredicted RBP15.74■□□□□ 0.11
ERBB2-205ENST00000578199 GLO1Q04760 184 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms