RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 HIST1H2ABP04908 130 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 NUDT7P0C024 238 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 PPIAL4GP0DN37 164 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 HLA-DOBP13765 273 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 APLNRP35414 380 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 RBM34P42696 430 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 DAP3P51398 398 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 CDH12P55289 794 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 WDR4P57081 412 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 PCBP3P57721 371 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 UBA52P62987 128 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 MRPS34P82930 218 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 MRPL28Q13084 256 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 ZNF718Q3SXZ3 478 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 AWAT1Q58HT5 328 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 DCAF12L2Q5VW00 463 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 FAHD2BQ6P2I3 314 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 SLC2A7Q6PXP3 512 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 HIST3H2AQ7L7L0 130 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 PATL1Q86TB9 770 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 LRP11Q86VZ4 500 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 TSPEARQ8WU66 669 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 LIPHQ8WWY8 451 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 HIST1H2ACQ93077 130 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 FAHD2AQ96GK7 314 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 C7orf26Q96N11 449 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 MOGAT1Q96PD6 335 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 EMC6Q9BV81 110 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 RABEP2Q9H5N1 569 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 MYEF2Q9P2K5 600 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 EIF3KQ9UBQ5 218 aaKnown RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 DUSP13Q9UII6 198 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 RAB21Q9UL25 225 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 ASAH2BP0C7U1 165 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 DRD4P21917 467 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 S100A5P33763 92 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 BPIFB3P59826 476 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 HOXC5Q00444 222 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 PIGFQ07326 219 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 MAD2L1BPQ15013 274 aaPredicted RBP9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 TMEM155Q4W5P6 130 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 FAM205BPQ63HN1 556 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 SLC16A14Q7RTX9 510 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 C10orf53Q8N6V4 93 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 C11orf65Q8NCR3 313 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 NOXO1Q8NFA2 376 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 MAL2Q969L2 176 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 VPS33AQ96AX1 596 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 SPDL1Q96EA4 605 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 MCHR1Q99705 422 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 RNF121Q9H920 327 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 SAP30LQ9HAJ7 183 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 NANSQ9NR45 359 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 SLC25A37Q9NYZ2 338 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 WIPI2Q9Y4P8 454 aa9.57□□□□□ -0.88
SMARCE1-214ENST00000578112 TMEM120BA0PK00 339 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 TRAPPC13A5PLN9 417 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 A8MXK9 166 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 SEC14L2O76054 403 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 FSTL3O95633 263 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 GCH1P30793 250 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 ARPC4P59998 168 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 INTS11Q5TA45 600 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 MSRB3Q8IXL7 192 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 NPEPL1Q8NDH3 523 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 RBM15BQ8NDT2 890 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 SIAEQ9HAT2 523 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 TAS2R5Q9NYW4 299 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 USH1CQ9Y6N9 552 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 ALPK2Q86TB3 2170 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 A0A1W2PRG6 482 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 POLR3GO15318 223 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 PRSS23O95084 383 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 MMP7P09237 267 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 TSPAN19P0C672 248 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 THRBP10828 461 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 MAGEB1P43366 347 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 CLRN1P58418 232 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 LRFN4Q6PJG9 635 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 ARL9Q6T311 187 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 RBMS3Q6XE24 437 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 MAVSQ7Z434 540 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 SYT9Q86SS6 491 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 SPICQ8N5J4 248 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 LRRC17Q8N6Y2 441 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 ZDHHC22Q8N966 263 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 VANGL1Q8TAA9 524 aaPredicted RBP9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 ST7LQ8TDW4 575 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 ALG12Q9BV10 488 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 MRPL13Q9BYD1 178 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 SLITRK2Q9H156 845 aa9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 DDX28Q9NUL7 540 aaKnown RBP9.56□□□□□ -0.88
SMARCE1-214ENST00000578112 LYPD3O95274 346 aa9.55□□□□□ -0.88
SMARCE1-214ENST00000578112 LCKP06239 509 aa9.55□□□□□ -0.88
SMARCE1-214ENST00000578112 QDPRP09417 244 aa9.55□□□□□ -0.88
SMARCE1-214ENST00000578112 COX5BP10606 129 aa9.55□□□□□ -0.88
SMARCE1-214ENST00000578112 ZNF81P51508 661 aa9.55□□□□□ -0.88
SMARCE1-214ENST00000578112 PSMD7P51665 324 aa9.55□□□□□ -0.88
SMARCE1-214ENST00000578112 ARHGDIAP52565 204 aa9.55□□□□□ -0.88
SMARCE1-214ENST00000578112 PCBD1P61457 104 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms