RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 OR2J1Q9GZK6 312 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 SDR39U1Q9NRG7 319 aaPredicted RBP16.75■□□□□ 0.27
CCDC40-206ENST00000572083 EGFL7Q9UHF1 273 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 INSIG2Q9Y5U4 225 aa16.75■□□□□ 0.27
CCDC40-206ENST00000572083 CLDN34H7C241 214 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 CH25HO95992 272 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 IGHV4-38-2P0DP08 117 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 STOMP27105 288 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 AQP1P29972 269 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 VSNL1P62760 191 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 CDK6Q00534 326 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 ZNF74Q16587 644 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 SWT1Q5T5J6 900 aaKnown RBP16.74■□□□□ 0.27
CCDC40-206ENST00000572083 KLF14Q8TD94 323 aaPredicted RBP16.74■□□□□ 0.27
CCDC40-206ENST00000572083 MCHR2Q969V1 340 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 MSL2Q9HCI7 577 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 SSU72Q9NP77 194 aaKnown RBP16.74■□□□□ 0.27
CCDC40-206ENST00000572083 SLC25A37Q9NYZ2 338 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 SLC13A4Q9UKG4 626 aa16.74■□□□□ 0.27
CCDC40-206ENST00000572083 C5orf49A4QMS7 147 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 KPNA4O00629 521 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-206ENST00000572083 RGS16O15492 202 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-206ENST00000572083 IGHG1P01857 330 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 ZNF84P51523 738 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 HHATQ5VTY9 493 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 RFPL4BQ6ZWI9 263 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 MSRB3Q8IXL7 192 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 PARP8Q8N3A8 854 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 KLHL36Q8N4N3 616 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 SPICQ8N5J4 248 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 GOLGA6L1Q8N7Z2 621 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 NOXO1Q8NFA2 376 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 BHLHE22Q8NFJ8 381 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-206ENST00000572083 ZBTB9Q96C00 473 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 DIRC2Q96SL1 478 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 PATZ1Q9HBE1 687 aaKnown RBP16.73■□□□□ 0.27
CCDC40-206ENST00000572083 KCNK9Q9NPC2 374 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 NANSQ9NR45 359 aa16.73■□□□□ 0.27
CCDC40-206ENST00000572083 PDP1Q9P0J1 537 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-206ENST00000572083 POLR3KQ9Y2Y1 108 aaPredicted RBP16.73■□□□□ 0.27
CCDC40-206ENST00000572083 MDFIC2A0A1B0GVS7 189 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 PRORSD1PA6NEY8 169 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 M0R3H8 397 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 CHP2O43745 196 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 ADH4P08319 380 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 SCARB2Q14108 478 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 HIST3H3Q16695 136 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 NRN1LQ496H8 165 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 MBNL2Q5VZF2 373 aaKnown RBP16.72■□□□□ 0.27
CCDC40-206ENST00000572083 LINC00114Q6XXX2 140 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 HIPK4Q8NE63 616 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 ABHD4Q8TB40 342 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 MAELQ96JY0 434 aaKnown RBP16.72■□□□□ 0.27
CCDC40-206ENST00000572083 POM121L2Q96KW2 1035 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 OR52B2Q96RD2 323 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 MCHR1Q99705 422 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 TMEM109Q9BVC6 243 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 CCNB1IP1Q9NPC3 277 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 CYSLTR2Q9NS75 346 aa16.72■□□□□ 0.27
CCDC40-206ENST00000572083 LOC100509620A0A075B734 347 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 CPSF4LA6NMK7 179 aaKnown RBP16.71■□□□□ 0.27
CCDC40-206ENST00000572083 UMPSP11172 480 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 ZNF32P17041 273 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 CDAP32320 146 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 MTNR1AP48039 350 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 SLC6A9P48067 706 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 TNFAIP6P98066 277 aaPredicted RBP16.71■□□□□ 0.27
CCDC40-206ENST00000572083 OCLNQ16625 522 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 MAVSQ7Z434 540 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 ARMC8Q8IUR7 673 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 SMYD1Q8NB12 490 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 OR52E2Q8NGJ4 325 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 AKR7LQ8NHP1 331 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 WFDC12Q8WWY7 111 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 ZNF607Q96SK3 696 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 KCNN2Q9H2S1 579 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 TMEM106BQ9NUM4 274 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 SLAMF8Q9P0V8 285 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 EIF3KQ9UBQ5 218 aaKnown RBP16.71■□□□□ 0.27
CCDC40-206ENST00000572083 ZDHHC8Q9ULC8 765 aa16.71■□□□□ 0.27
CCDC40-206ENST00000572083 A8MXK9 166 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 MCIDASD6RGH6 385 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 UBDO15205 165 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 SLC2A10O95528 541 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 KNG1P01042 644 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 THY1P04216 161 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 CD55P08174 381 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 ZMYND11Q15326 602 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 ZNF613Q6PF04 617 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 C16orf87Q6PH81 154 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 NANOGNBQ7Z5D8 188 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 KIR3DL3Q8N743 410 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 ANKRD42Q8N9B4 389 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 AENQ8WTP8 325 aaKnown RBP16.7■□□□□ 0.26
CCDC40-206ENST00000572083 ARHGDIGQ99819 225 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 CENPHQ9H3R5 247 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 SLCO1B3Q9NPD5 702 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 ARMCX1Q9P291 453 aa16.7■□□□□ 0.26
CCDC40-206ENST00000572083 CGGBP1Q9UFW8 167 aaPredicted RBP16.7■□□□□ 0.26
CCDC40-206ENST00000572083 OR5V1Q9UGF6 321 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms