RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 CDK10Q15131 360 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 FAM219AQ8IW50 185 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 SLITRK4Q8IW52 837 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 UEVLDQ8IX04 471 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 C9orf40Q8IXQ3 194 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 SEC22AQ96IW7 307 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 SARGQ9BW04 601 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 DUSP15Q9H1R2 295 aaPredicted RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 PPP1R3EQ9H7J1 279 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 COLQQ9Y215 455 aaPredicted RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 TRAV36DV7A0A075B6V5 113 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 NPIPA2E9PIF3 369 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 NPIPA3F8WFD2 350 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 SLC33A1O00400 549 aaPredicted RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 PLPP2O43688 288 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 RBMS1P29558 406 aaKnown RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 LCN1P31025 176 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 AGFG1P52594 562 aaKnown RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 PUDPQ08623 228 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 EBPQ15125 230 aaKnown RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 TRAM1Q15629 374 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 MESTQ5EB52 335 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 STAC2Q6ZMT1 411 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 C17orf107Q6ZR85 190 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 OR2G2Q8NGZ5 317 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 MAPK3P27361 379 aaPredicted RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 FAUP35544 74 aaKnown RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 CLDN17P56750 224 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 LYPD8Q6UX82 237 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 ARIH2OSQ8N7S6 290 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 SLC38A9Q8NBW4 561 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 OR14A16Q8NHC5 309 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 ASB12Q8WXK4 309 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 CCDC74BQ96LY2 380 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 PTDSS2Q9BVG9 487 aa14.65□□□□□ -0.06
RAB40B-206ENST00000571995 MRM2Q9UI43 246 aaKnown RBP14.65□□□□□ -0.06
RAB40B-206ENST00000571995 UBL3O95164 117 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 HTR3BO95264 441 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 PLAURQ03405 335 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 LINC00696Q6ZRV3 163 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 FAM57BQ71RH2 274 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 CMBLQ96DG6 245 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 BANF2Q9H503 90 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 INPP5EQ9NRR6 644 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 ZNF701Q9NV72 531 aaPredicted RBP14.64□□□□□ -0.07
RAB40B-206ENST00000571995 HPF1Q9NWY4 346 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 GSKIPQ9P0R6 139 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 ASH2LQ9UBL3 628 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 L7N2F9 121 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 ANKRD34CP0C6C1 535 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 RBM34P42696 430 aaKnown RBP14.64□□□□□ -0.07
RAB40B-206ENST00000571995 IFITM2Q01629 132 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 OR10K1Q8NGX5 313 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 NUPL2O15504 423 aaKnown RBP14.64□□□□□ -0.07
RAB40B-206ENST00000571995 CYB5AP00167 134 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 ENDOUP21128 410 aaKnown RBP14.64□□□□□ -0.07
RAB40B-206ENST00000571995 FASLGP48023 281 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 POLR2HP52434 150 aaKnown RBP14.64□□□□□ -0.07
RAB40B-206ENST00000571995 SCRN3Q0VDG4 424 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 PLA2G7Q13093 441 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 NR0B2Q15466 257 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 GLT8D1Q68CQ7 371 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 TPRA1Q86W33 373 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 SPEM1Q8N4L4 309 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 MAFIPQ8WZ33 124 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 CTHRC1Q96CG8 243 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 WDFY2Q96P53 400 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 ZNF160Q9HCG1 818 aa14.64□□□□□ -0.07
RAB40B-206ENST00000571995 DIDO1Q9BTC0 2240 aaKnown RBP14.63□□□□□ -0.07
RAB40B-206ENST00000571995 A8MVM7 634 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 PRR32B1ATL7 298 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 EEF1E1-BLOC1S5C9J1V9 151 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 GOSR2O14653 212 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 KLF4O43474 513 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 TLX3O43711 291 aaPredicted RBP14.63□□□□□ -0.07
RAB40B-206ENST00000571995 ZFAND5O76080 213 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 CCDC58Q4VC31 144 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 DMKNQ6E0U4 476 aaPredicted RBP14.63□□□□□ -0.07
RAB40B-206ENST00000571995 AWAT2Q6E213 333 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 DNM1P34Q6PK57 102 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 SLC16A9Q7RTY1 509 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 IL22RA1Q8N6P7 574 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 LILRB4Q8NHJ6 448 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 PGAM5Q96HS1 289 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 ARL6Q9H0F7 186 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 SLC39A1Q9NY26 324 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 FRRS1LQ9P0K9 344 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 TRAPPC4Q9Y296 219 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 NOX1Q9Y5S8 564 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 TMEM235A6NFC5 223 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 ZNF878C9JN71 531 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 OR2T1O43869 369 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 CFL1P23528 166 aaKnown RBP14.63□□□□□ -0.07
RAB40B-206ENST00000571995 NDUFA5Q16718 116 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 WDR38Q5JTN6 314 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 CFAP77Q6ZQR2 320 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 ZNF687Q8N1G0 1237 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 OR5L2Q8NGL0 311 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 MSANTD3Q96H12 275 aa14.63□□□□□ -0.07
RAB40B-206ENST00000571995 MED18Q9BUE0 208 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms