RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NHLRC1Q6VVB1 395 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 GALNT11Q8NCW6 608 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 PCNPQ8WW12 178 aaKnown RBP11.81□□□□□ -0.52
USB1-207ENST00000563149 ADOQ96SZ5 270 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 AMELYQ99218 206 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 POTEKPQ9BYX7 375 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 ULBP3Q9BZM4 244 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 SEMA4CQ9C0C4 833 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 NKX2-4Q9H2Z4 354 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 TXNIPQ9H3M7 391 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 CKLFQ9UBR5 152 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 DHDHQ9UQ10 334 aa11.81□□□□□ -0.52
USB1-207ENST00000563149 TMEM272A0A1B0GTI8 110 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 A0A1W2PPC4 97 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 TLCD2A6NGC4 264 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 H3BUI4 141 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 GOSR2O14653 212 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 HCRTR2O43614 444 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 TSPAN2O60636 221 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 ICOSLGO75144 302 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 DXOO77932 396 aaKnown RBP11.8□□□□□ -0.52
USB1-207ENST00000563149 HLA-DQA2P01906 255 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 NMBP08949 121 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 RPA2P15927 270 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 IGFBP3P17936 291 aaPredicted RBP11.8□□□□□ -0.52
USB1-207ENST00000563149 IL12BP29460 328 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 CAPZA1P52907 286 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 H2BFSP57053 126 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 GK2Q14410 553 aaPredicted RBP11.8□□□□□ -0.52
USB1-207ENST00000563149 ELAVL1Q15717 326 aaKnown RBP11.8□□□□□ -0.52
USB1-207ENST00000563149 SLC51BQ86UW2 128 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 GABRG1Q8N1C3 465 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 MUC20Q8N307 709 aaPredicted RBP11.8□□□□□ -0.52
USB1-207ENST00000563149 ZNF321PQ8N8H1 164 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 OR51S1Q8NGJ8 323 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 OR5M1Q8NGP8 315 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 OR8K3Q8NH51 312 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 ZNF721Q8TF20 911 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 TNFAIP8L1Q8WVP5 186 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 SLC25A28Q96A46 364 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 ZNF524Q96C55 264 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 MVB12AQ96EY5 273 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 ZNF587Q96SQ5 575 aaPredicted RBP11.8□□□□□ -0.52
USB1-207ENST00000563149 ELF4Q99607 663 aaPredicted RBP11.8□□□□□ -0.52
USB1-207ENST00000563149 SLC38A3Q99624 504 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 RAB33BQ9H082 229 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 ATG5Q9H1Y0 275 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 EXO5Q9H790 373 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 SOHLH2Q9NX45 425 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 GLS2Q9UI32 602 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 KCNMB2Q9Y691 235 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 KIAA0100Q14667 2235 aaKnown RBP11.8□□□□□ -0.52
USB1-207ENST00000563149 CHD7Q9P2D1 2997 aa11.8□□□□□ -0.52
USB1-207ENST00000563149 IGKV3D-11A0A0A0MRZ8 115 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 IGLV1-36A0A0B4J1U3 117 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 ARPC5O15511 151 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 CD3DP04234 171 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 LPLP06858 475 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 ZNF35P13682 527 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 CRABP1P29762 137 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 POLR2HP52434 150 aaKnown RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 ACKR1Q16570 336 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 CLVS2Q5SYC1 327 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 ARHGAP40Q5TG30 622 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 TMEM225Q6GV28 225 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 TMEM205Q6UW68 189 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 GSG1LQ6UXU4 331 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 LRRC69Q6ZNQ3 347 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 OVCH2Q7RTZ1 564 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 CATSPERDQ86XM0 798 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 GKN2Q86XP6 184 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 METTL27Q8N6F8 245 aaPredicted RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 FRMD1Q8N878 549 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 ZNF784Q8NCA9 323 aaPredicted RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 OR6M1Q8NGM8 313 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 OR1J4Q8NGS1 313 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 OR6K3Q8NGY3 331 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 STK35Q8TDR2 534 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 ASB5Q8WWX0 329 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 PTX4Q96A99 478 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 C8orf44Q96CB5 159 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 DPYSL5Q9BPU6 564 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 PTDSS2Q9BVG9 487 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 OR8D2Q9GZM6 311 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 ARL6Q9H0F7 186 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 CD207Q9UJ71 328 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 A0A1B0GW55 424 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 A0A1W2PPC1 479 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 RFPL4AA6NLU0 287 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 A8MVM7 634 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 C11orf98E9PRG8 122 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 RFPL4AL1F8VTS6 287 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 NUDT21O43809 227 aaKnown RBP11.79□□□□□ -0.52
USB1-207ENST00000563149 NPIPB7O75200 414 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 SCO1O75880 301 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 DDAH2O95865 285 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
USB1-207ENST00000563149 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms