RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PRODH2Q9UF12 536 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 LAMP5Q9UJQ1 280 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 ZNF835Q9Y2P0 537 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 GMPPBQ9Y5P6 360 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 RELNP78509 3460 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 THADAQ6YHU6 1953 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 NBEAQ8NFP9 2946 aa2.89□□□□□ -1.95
HERC1-215ENST00000561436 PPIAL4CA0A0B4J2A2 164 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 A0A1B0GWJ7 208 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 A0A1B0GX78 115 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 VSTM2BA6NLU5 285 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 A8MX80 341 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 G3V3Y1 287 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 CCL21O00585 134 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 PHF1O43189 567 aaPredicted RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 LANCL1O43813 399 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 TRIM3O75382 744 aaPredicted RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 POP7O75817 140 aaKnown RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 OR2B3O76000 313 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SERPINA7P05543 415 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 KRT8P05787 483 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 CT45A10P0DMU9 189 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 PPIAL4GP0DN37 164 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 PRDX3P30048 256 aaKnown RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 MIPP30301 263 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SHMT2P34897 504 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 CYLC1P35663 651 aaPredicted RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 TDGF1P3P51864 188 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 KPNA2P52292 529 aaKnown RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 IST1P53990 364 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 STX17P56962 302 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 RELAQ04206 551 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 COX10Q12887 443 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 XRCC4Q13426 336 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 LTB4RQ15722 352 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 CYP51A1Q16850 503 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SLC36A3Q495N2 470 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 NKAIN1Q4KMZ8 207 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 EIPR1Q53HC9 387 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 FAM199XQ6PEV8 388 aaPredicted RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 CBLN3Q6UW01 205 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 C2orf66Q6UXQ4 117 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 NDUFAF7Q7L592 441 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 LHFPL4Q7Z7J7 247 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 BIVMQ86UB2 503 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 PAQR7Q86WK9 346 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 TGIF2LYQ8IUE0 185 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 TRAPPC5Q8IUR0 188 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 CADM2Q8N3J6 435 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 GPR26Q8NDV2 337 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 LCN9Q8WX39 176 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 N4BP2L2Q92802 583 aaPredicted RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 IMP4Q96G21 291 aaKnown RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 VPS39Q96JC1 886 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 VAT1Q99536 393 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 ZNF670Q9BS34 389 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SNRNP25Q9BV90 132 aaKnown RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 HCAR1Q9BXC0 346 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SLC25A51Q9H1U9 297 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SRMSQ9H3Y6 488 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SUDS3Q9H7L9 328 aaPredicted RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 C14orf105Q9NVL8 296 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 ZNF446Q9NWS9 450 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 EHFQ9NZC4 300 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SEC14L3Q9UDX4 400 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SLC23A2Q9UGH3 650 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 RSPH14Q9UHP6 348 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 CD84Q9UIB8 345 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 B9D1Q9UPM9 204 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 MEMO1Q9Y316 297 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 MAD1L1Q9Y6D9 718 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 BZW2Q9Y6E2 419 aaKnown RBP2.88□□□□□ -1.95
HERC1-215ENST00000561436 SPACA6W5XKT8 324 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 PTPRQQ9UMZ3 2332 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 SCN1AP35498 2009 aa2.88□□□□□ -1.95
HERC1-215ENST00000561436 EML5Q05BV3 1969 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 IGLV3-12A0A075B6K2 115 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 LOC285095A0A1B0GVY8 99 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 OR6C74A6NCV1 312 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 OR52A4PA6NMU1 304 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 TXNDC9O14530 226 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 SLC19A2O60779 497 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 TSPAN12O95859 305 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 RPN2P04844 631 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 FOLR2P14207 255 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 PGAM2P15259 253 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 ATP5A1P25705 553 aaKnown RBP2.87□□□□□ -1.95
HERC1-215ENST00000561436 OTX2P32243 289 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 CA5AP35218 305 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 SOX6P35712 828 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 SPAM1P38567 509 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 ARG2P78540 354 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 TLE4Q04727 773 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 IL18R1Q13478 541 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 TIMM50Q3ZCQ8 353 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 TEX44Q53QW1 395 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 METTL11BQ5VVY1 283 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 MLIPQ5VWP3 458 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 TMEM220Q6QAJ8 160 aa2.87□□□□□ -1.95
HERC1-215ENST00000561436 SPESP1Q6UW49 350 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms