RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 CSAG2Q9Y5P2 127 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 COLCA2A8K830 154 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 TXNL1O43396 289 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 FGF17O60258 216 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 ZNF735P0CB33 412 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 SMIM6P0DI80 62 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 RD3LP0DJH9 198 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 TPT1P13693 172 aaKnown RBP14.94□□□□□ -0.02
TPM1-228ENST00000560975 TLX1P31314 330 aaPredicted RBP14.94□□□□□ -0.02
TPM1-228ENST00000560975 P2RY2P41231 377 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 RBM34P42696 430 aaKnown RBP14.94□□□□□ -0.02
TPM1-228ENST00000560975 PGDP52209 483 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 DHCR24Q15392 516 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 ZNF761Q86XN6 746 aaPredicted RBP14.94□□□□□ -0.02
TPM1-228ENST00000560975 TMEM229BQ8NBD8 167 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 OR2S2Q9NQN1 319 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 MPDZO75970 2070 aa14.94□□□□□ -0.02
TPM1-228ENST00000560975 EIF1BO60739 113 aaKnown RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 ABHD16AO95870 558 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 F13BP05160 661 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 CD79AP11912 226 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 ST6GAL1P15907 406 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 MUC1P15941 1255 aaPredicted RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 SDHAP31040 664 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 EIF1P41567 113 aaKnown RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 LPCAT3Q6P1A2 487 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 TMPPEQ6ZT21 453 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 SLC29A4Q7RTT9 530 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 BAP18Q8IXM2 172 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 TMEM52Q8NDY8 209 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 OR4K17Q8NGC6 315 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 RNF141Q8WVD5 230 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 FOXRED1Q96CU9 486 aaPredicted RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 DNAJA3Q96EY1 480 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 LRFN5Q96NI6 719 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 WDR76Q9H967 626 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 CGGBP1Q9UFW8 167 aaPredicted RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 TMED7Q9Y3B3 224 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 P2RX6O15547 441 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 CISD3P0C7P0 127 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 AKR1C4P17516 323 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 TSFMP43897 325 aaKnown RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 CXADRP78310 365 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 IL13RA1P78552 427 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 ELAVL1Q15717 326 aaKnown RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 EIF2S3LQ2VIR3 472 aaKnown RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 ULK3Q6PHR2 472 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 ACKR4Q9NPB9 350 aa14.93□□□□□ -0.02
TPM1-228ENST00000560975 RPH3AQ9Y2J0 694 aaPredicted RBP14.93□□□□□ -0.02
TPM1-228ENST00000560975 THSD7BQ9C0I4 1608 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 A0A1W2PPE3 182 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 TMEM235A6NFC5 223 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 DOK2O60496 412 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 ECH1Q13011 328 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 TGIF1Q15583 401 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 NNATQ16517 81 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 MOGAT2Q3SYC2 334 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 CDNFQ49AH0 187 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 TMEM52BQ4KMG9 183 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 USP53Q70EK8 1073 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 PRSS41Q7RTY9 318 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 TMEM200AQ86VY9 491 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 MISPQ8IVT2 679 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 ZNF595Q8IYB9 648 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 AMELYQ99218 206 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 NRIP2Q9BQI9 281 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 MMP26Q9NRE1 261 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 DAPP1Q9UN19 280 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 SLC22A13Q9Y226 551 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 YBX2Q9Y2T7 364 aaKnown RBP14.92□□□□□ -0.02
TPM1-228ENST00000560975 TRBV23OR9-2A0A075B6M9 112 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 KIR3DL2P43630 455 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 ADAM8P78325 824 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 EIF2B1Q14232 305 aaKnown RBP14.92□□□□□ -0.02
TPM1-228ENST00000560975 ZNF77Q15935 545 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 LYG2Q86SG7 212 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 OR5T3Q8NGG3 340 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 CLCC1Q96S66 551 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 RHOFQ9HBH0 211 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 GHRLQ9UBU3 117 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 KLK13Q9UKR3 277 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 FBXL21Q9UKT6 434 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 INSL6Q9Y581 213 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 HEATR5AQ86XA9 2040 aa14.92□□□□□ -0.02
TPM1-228ENST00000560975 TTLL8A6PVC2 850 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 C1orf196B1AJZ1 125 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 B3GALT2O43825 422 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 MOSPD3O75425 235 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 MELTFP08582 738 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 ZBTB25P24278 435 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 PTAFRP25105 342 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 ABCD3P28288 659 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 SRSF4Q08170 494 aaKnown RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 PJVKQ0ZLH3 352 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 HNRNPA1L2Q32P51 320 aaKnown RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 WDR38Q5JTN6 314 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 ZNF704Q6ZNC4 412 aaPredicted RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 SKA3Q8IX90 412 aa14.91□□□□□ -0.02
TPM1-228ENST00000560975 SAMD14Q8IZD0 417 aaPredicted RBP14.91□□□□□ -0.02
TPM1-228ENST00000560975 CHMP1AQ9HD42 196 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms