RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CXCR1P25024 350 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 FPR3P25089 353 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 RPL13AP40429 203 aaKnown RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 OR3A1P47881 315 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 RAG2P55895 527 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 CLDN6P56747 220 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 TAS2R41P59536 307 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 SELENOTP62341 195 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 NTHL1P78549 312 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 SLC25A3Q00325 362 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 C2orf80Q0P641 193 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MFAP5Q13361 173 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 OR8G1Q15617 311 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 UPP1Q16831 310 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 PLPPR5Q32ZL2 321 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 SNAI3Q3KNW1 292 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ZNF585BQ52M93 769 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 TMEM97Q5BJF2 176 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 GPRC6AQ5T6X5 926 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ANKRD22Q5VYY1 191 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 SLC22A10Q63ZE4 541 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 GRHL2Q6ISB3 625 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MFSD12Q6NUT3 480 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ZNF790Q6PG37 636 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 BTNL8Q6UX41 500 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 PLXDC2Q6UX71 529 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 RNF144BQ7Z419 303 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 DHDDSQ86SQ9 333 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ACOT1Q86TX2 421 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 LRRC52Q8N7C0 313 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ZSCAN4Q8NAM6 433 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 FAM98AQ8NCA5 519 aaKnown RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 SLC26A10Q8NG04 563 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 OR5B3Q8NH48 314 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 OR52I2Q8NH67 350 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 EEF1AKMT1Q8WVE0 214 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 DNASE2BQ8WZ79 361 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 RPL3LQ92901 407 aaKnown RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 RAB8BQ92930 207 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 TM4SF18Q96CE8 201 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 SDSLQ96GA7 329 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 CENPNQ96H22 339 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 C12orf42Q96LP6 360 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ZNF354BQ96LW1 612 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ALKBH3Q96Q83 286 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MBOAT4Q96T53 435 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 PSMB7Q99436 277 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ARHGDIGQ99819 225 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 FUNDC2Q9BWH2 189 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MS4A8Q9BY19 250 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 TBL1XR1Q9BZK7 514 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 TKTL2Q9H0I9 626 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 DCSTAMPQ9H295 470 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 REEP4Q9H6H4 257 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ARMC7Q9H6L4 198 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MAGIXQ9H6Y5 334 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 UBE2ZQ9H832 354 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 NIPAL2Q9H841 368 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 CACYBPQ9HB71 228 aaKnown RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MSL2Q9HCI7 577 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 NOX4Q9NPH5 578 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 IL17RBQ9NRM6 502 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MED29Q9NX70 200 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 DUS2Q9NX74 493 aaKnown RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 FLRT1Q9NZU1 646 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ARMCX1Q9P291 453 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 VPS29Q9UBQ0 182 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ING1Q9UK53 422 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 OAZ3Q9UMX2 235 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 ATG4BQ9Y4P1 393 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 WNT6Q9Y6F9 365 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 MYH11P35749 1972 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 PDS5BQ9NTI5 1447 aa4.01□□□□□ -1.77
HMGB3P26-201ENST00000560051 FYCO1Q9BQS8 1478 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 C1orf226A1L170 272 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 MEIOCA2RUB1 952 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 TRAPPC13A5PLN9 417 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 ASPDHA6ND91 283 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 ANKUB1A6NFN9 424 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 LRRC3CA6NJW4 275 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 PATE3B3GLJ2 98 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 F5H768 121 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 H7C417 338 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 CASKO14936 926 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 FGF16O43320 207 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 PRAF2O60831 178 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 CTSVO60911 334 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 ZNF217O75362 1048 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 GRAP2O75791 330 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 ANXA9O76027 345 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 CNIH1O95406 144 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 SERPINA7P05543 415 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 WNT2P09544 360 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 GIPP09681 153 aaPredicted RBP4□□□□□ -1.77
HMGB3P26-201ENST00000560051 CT45A8P0DMV1 189 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 CT45A9P0DMV2 189 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 FOLR2P14207 255 aa4□□□□□ -1.77
HMGB3P26-201ENST00000560051 B4GALT1P15291 398 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms