RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DEFB110Q30KQ9 67 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 PCNPQ8WW12 178 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 ASIC5Q9NY37 505 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF256Q9Y2P7 627 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 BCAT2O15382 392 aaPredicted RBP12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 ADPRHP54922 357 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF628Q5EBL2 1059 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 TXNRD3NBQ6F5E7 133 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 PM20D1Q6GTS8 502 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 TOMM20LQ6UXN7 152 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 AAED1Q7RTV5 226 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 TMEM59LQ9UK28 342 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 GPR37O15354 613 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR3A1P47881 315 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 REC114Q7Z4M0 266 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 PHYHIPQ92561 330 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 KLRG1Q96E93 195 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 PAPLNO95428 1278 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 CCR6P51684 374 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 Q499Y3 187 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 LETMD1Q6P1Q0 360 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR4A4PQ8NGN8 299 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR14A16Q8NHC5 309 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 RBM14Q96PK6 669 aaKnown RBP12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 NPY6RQ99463 290 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 B3GALT5Q9Y2C3 310 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 MAP2K6P52564 334 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 RRADP55042 308 aa12.8□□□□□ -0.36
CSPG4P12-202ENST00000559989 NTSR1P30989 418 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 RING1Q06587 406 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 DOC2BQ14184 412 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 FAM3DQ96BQ1 224 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 RTL8AQ9BWD3 113 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 PPRC1Q5VV67 1664 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC5A10A0PJK1 596 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF264O43296 627 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 CER1O95813 267 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ABLIM2Q6H8Q1 611 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 GDF2Q9UK05 429 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ACOD1A6NK06 481 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 PLSCR1O15162 318 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 FCGR2CP31995 323 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 MTMR14Q8NCE2 650 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 FUBP1Q96AE4 644 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 UTP23Q9BRU9 249 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 LAMP3Q9UQV4 416 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF716A6NP11 495 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 FAM166BA8MTA8 275 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 DDOSTP39656 456 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 GPR17Q13304 367 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR5AP2Q8NGF4 316 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR1L3Q8NH93 324 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 DIP2BQ9P265 1576 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 AQP9O43315 295 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 SNNO75324 88 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 TTRP02766 147 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 GJA4P35212 333 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 GALR1P47211 349 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ADPRMQ3LIE5 342 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF542PQ5EBM4 170 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 LCN15Q6UWW0 184 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF813Q6ZN06 617 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ACOT4Q8N9L9 421 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 C7orf43Q8WVR3 580 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 CDK2AP1O14519 115 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 TPOP07202 933 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 CST2P09228 141 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 TAS2R60P59551 318 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC5A12Q1EHB4 618 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 VRK2Q86Y07 508 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 PINX1Q96BK5 328 aaKnown RBP12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC30A3Q99726 388 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 CALHM2Q9HA72 323 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 ANKRD26Q9UPS8 1709 aa12.79□□□□□ -0.36
CSPG4P12-202ENST00000559989 MROH2AA6NES4 1674 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 M0R2Z0 102 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 EFSO43281 561 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 BMP5P22003 454 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 SPCS3P61009 180 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 RPS25P62851 125 aaKnown RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 TSPAN31Q12999 210 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 PXDC1Q5TGL8 231 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 SCGB1D4Q6XE38 83 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF547Q8IVP9 402 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 GPR78Q96P69 363 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 PEBP4Q96S96 227 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 TOX3O15405 576 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 F13BP05160 661 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR8G3PP0DMU2 310 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC25A4P12235 298 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 SSR4P51571 173 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 FCN2Q15485 313 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 GLYATL3Q5SZD4 288 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR5AR1Q8NGP9 310 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 DYNC2LI1Q8TCX1 351 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 CD80P33681 288 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 TNFRSF17Q02223 184 aa12.78□□□□□ -0.36
CSPG4P12-202ENST00000559989 C14orf80Q86SX3 495 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms