RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TSPYL5Q86VY4 417 aaPredicted RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 FUNDC1Q8IVP5 155 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 RFLNBQ8N5W9 214 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 DPP10Q8N608 796 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 LSMEM1Q8N8F7 131 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 LINC01356Q8N9X3 169 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 GLB1L3Q8NCI6 653 aaPredicted RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 ZNF540Q8NDQ6 660 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 CLDND2Q8NHS1 167 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 FGFBP3Q8TAT2 258 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 NEU4Q8WWR8 484 aaPredicted RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 PYDC1Q8WXC3 89 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 YIPF5Q969M3 257 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 SLC35B4Q969S0 331 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 MRPL24Q96A35 216 aaKnown RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 CCDC124Q96CT7 223 aaKnown RBP4.97□□□□□ -1.61
USP3-215ENST00000559771 TXNDC15Q96J42 360 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 MOGAT1Q96PD6 335 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 EMC6Q9BV81 110 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 RAB1BQ9H0U4 201 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 TPK1Q9H3S4 243 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 IKZF5Q9H5V7 419 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 C12orf10Q9HB07 376 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 MED29Q9NX70 200 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 ADA2Q9NZK5 511 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 CALML5Q9NZT1 146 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 AP4S1Q9Y587 144 aa4.97□□□□□ -1.61
USP3-215ENST00000559771 TRAV36DV7A0A075B6V5 113 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 A0A087WUJ7 227 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 A0A0B4J2E0 115 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 A0A1B0GX12 115 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 DPPA5A6NC42 116 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 M0R3G1 203 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 CLIC1O00299 241 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 FBP2O00757 339 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 TCF21O43680 179 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 SLC43A1O75387 559 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 RP2O75695 350 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 LYPD3O95274 346 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 THY1P04216 161 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 PATE4P0C8F1 98 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 IFNGR1P15260 489 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 TCN1P20061 433 aaPredicted RBP4.96□□□□□ -1.62
USP3-215ENST00000559771 HNF1AP20823 631 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 PRKAR1BP31321 381 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 ALDH3B1P43353 468 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 EVX1P49640 407 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 POLR2JP52435 117 aaKnown RBP4.96□□□□□ -1.62
USP3-215ENST00000559771 PIGFQ07326 219 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 NPRL3Q12980 569 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 DAG1Q14118 895 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 MFSD13AQ14CX5 517 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 MAD2L1BPQ15013 274 aaPredicted RBP4.96□□□□□ -1.62
USP3-215ENST00000559771 LARS2Q15031 903 aaKnown RBP4.96□□□□□ -1.62
USP3-215ENST00000559771 MTX3Q5HYI7 312 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 TMEM255AQ5JRV8 349 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 LRIF1Q5T3J3 769 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 FAM69AQ5T7M9 428 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 CARD17Q5XLA6 110 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 LCN8Q6JVE9 175 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 MSANTD1Q6ZTZ1 278 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 SPATA24Q86W54 205 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 DHFR2Q86XF0 187 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 SKA3Q8IX90 412 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 GPR137CQ8N3F9 429 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 PAQR4Q8N4S7 273 aaPredicted RBP4.96□□□□□ -1.62
USP3-215ENST00000559771 ADPRHL1Q8NDY3 354 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 OR6S1Q8NH40 331 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 SLC38A4Q969I6 547 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 LRRC58Q96CX6 371 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 SPDL1Q96EA4 605 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 ITCHQ96J02 903 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 ZBTB18Q99592 522 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 SH3GL1Q99961 368 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 KCNS3Q9BQ31 491 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 PLA2G12AQ9BZM1 189 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 MOV10Q9HCE1 1003 aaKnown RBP4.96□□□□□ -1.62
USP3-215ENST00000559771 CCDC167Q9P0B6 97 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 ACTR3BQ9P1U1 418 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 REV1Q9UBZ9 1251 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 RIMS3Q9UJD0 308 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 LEF1Q9UJU2 399 aaPredicted RBP4.96□□□□□ -1.62
USP3-215ENST00000559771 IFT52Q9Y366 437 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 SPEF1Q9Y4P9 236 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 GMEB1Q9Y692 573 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 DYSFO75923 2080 aa4.96□□□□□ -1.62
USP3-215ENST00000559771 PRORSD1PA6NEY8 169 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 PLPP3O14495 311 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 SYNGR3O43761 229 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 AHCYL1O43865 530 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 OR2T1O43869 369 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 TNFAIP8O95379 198 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 CLPTM1O96005 669 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 NAT2P11245 290 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 ETS2P15036 469 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 B4GALT1P15291 398 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 EGR1P18146 543 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 PEX2P28328 305 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 GLRXP35754 106 aa4.95□□□□□ -1.62
USP3-215ENST00000559771 MAGEB1P43366 347 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms