RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 MTPNP58546 118 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 RPL18Q07020 188 aaKnown RBP11.13□□□□□ -0.63
TPM1-220ENST00000559556 SELPLGQ14242 412 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 MOGQ16653 247 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 HFEQ30201 348 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 DCAF12L2Q5VW00 463 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 HIST3H2AQ7L7L0 130 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 LRRC18Q8N456 261 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 ICA1LQ8NDH6 482 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 OR1J1Q8NGS3 322 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 SGMS2Q8NHU3 365 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 LRRC8CQ8TDW0 803 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 STON2Q8WXE9 905 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 HIST1H2ACQ93077 130 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 TAMM41Q96BW9 452 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 ELMOD3Q96FG2 381 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 CGREF1Q99674 301 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 KAT8Q9H7Z6 458 aaKnown RBP11.13□□□□□ -0.63
TPM1-220ENST00000559556 DECR2Q9NUI1 292 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 CACNG2Q9Y698 323 aa11.13□□□□□ -0.63
TPM1-220ENST00000559556 A0A1W2PRG6 482 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 NPIPB13A6NJU9 1138 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 NPIPB4C9JG80 1138 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 MCIDASD6RGH6 385 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 BLOC1S5-TXNDC5H3BN57 136 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 IGF2P01344 180 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 MT-ND1P03886 318 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 F13BP05160 661 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 ADH4P08319 380 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 VIMP08670 466 aaKnown RBP11.12□□□□□ -0.63
TPM1-220ENST00000559556 TSPAN19P0C672 248 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 ACADSP16219 412 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 ADRA2CP18825 462 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 DRD4P21917 467 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 PCGF2P35227 344 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 WNT5AP41221 380 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 DAP3P51398 398 aaKnown RBP11.12□□□□□ -0.63
TPM1-220ENST00000559556 MMP15P51511 669 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 CRYBA2P53672 197 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 UGT2B15P54855 530 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 MRPS34P82930 218 aaKnown RBP11.12□□□□□ -0.63
TPM1-220ENST00000559556 HSF2Q03933 536 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 GLO1Q04760 184 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 PABPC1L2AQ5JQF8 200 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 TMEM255AQ5JRV8 349 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 INTS11Q5TA45 600 aaKnown RBP11.12□□□□□ -0.63
TPM1-220ENST00000559556 RETREG3Q86VR2 466 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 ZNF101Q8IZC7 436 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 SYT14Q8NB59 555 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
TPM1-220ENST00000559556 IPCEF1Q8WWN9 437 aaPredicted RBP11.12□□□□□ -0.63
TPM1-220ENST00000559556 RASSF5Q8WWW0 418 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 RAB1CQ92928 201 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 NABP1Q96AH0 204 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 TIMD4Q96H15 378 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 SLC6A7Q99884 636 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 RABEP2Q9H5N1 569 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 SIAEQ9HAT2 523 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 SMURF2Q9HAU4 748 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 ESM1Q9NQ30 184 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 STX18Q9P2W9 335 aaKnown RBP11.12□□□□□ -0.63
TPM1-220ENST00000559556 UGT2A1Q9Y4X1 527 aa11.12□□□□□ -0.63
TPM1-220ENST00000559556 H3BSA7 217 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 TPD52L2O43399 206 aaKnown RBP11.11□□□□□ -0.63
TPM1-220ENST00000559556 ICMTO60725 284 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 TRMUO75648 421 aaKnown RBP11.11□□□□□ -0.63
TPM1-220ENST00000559556 UBOX5O94941 541 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 SLC2A10O95528 541 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 IGHV1-46P01743 117 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 H2AFXP16104 143 aaPredicted RBP11.11□□□□□ -0.63
TPM1-220ENST00000559556 ZNF32P17041 273 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 MAKP20794 623 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 STOMP27105 288 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 RBM34P42696 430 aaKnown RBP11.11□□□□□ -0.63
TPM1-220ENST00000559556 ZNF81P51508 661 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 TSTQ16762 297 aaKnown RBP11.11□□□□□ -0.63
TPM1-220ENST00000559556 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 ZNF718Q3SXZ3 478 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 ARMC4Q5T2S8 1044 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 AGBL2Q5U5Z8 902 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 CCDC80Q76M96 950 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 ZDHHC22Q8N966 263 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 NANPQ8TBE9 248 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 LIPHQ8WWY8 451 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 NMD3Q96D46 503 aaKnown RBP11.11□□□□□ -0.63
TPM1-220ENST00000559556 MARS2Q96GW9 593 aaKnown RBP11.11□□□□□ -0.63
TPM1-220ENST00000559556 POM121L2Q96KW2 1035 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 GAL3ST1Q99999 423 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 INIPQ9NRY2 104 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 CGGBP1Q9UFW8 167 aaPredicted RBP11.11□□□□□ -0.63
TPM1-220ENST00000559556 OPN4Q9UHM6 478 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 NDUFAF1Q9Y375 327 aa11.11□□□□□ -0.63
TPM1-220ENST00000559556 LOC100509620A0A075B734 347 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 PLSCR5A0PG75 271 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 ANGPT2O15123 496 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 OR7A10O76100 309 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 GCH1P30793 250 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 CDAP32320 146 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 MPV17P39210 176 aa11.1□□□□□ -0.63
TPM1-220ENST00000559556 FMODQ06828 376 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms