RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 OR10AC1Q8NH08 325 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 ELSPBP1Q96BH3 223 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 BMFQ96LC9 184 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 DMRTA2Q96SC8 542 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 PBX4Q9BYU1 374 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 BARX1Q9HBU1 254 aaPredicted RBP14.72□□□□□ -0.05
SHMT2-231ENST00000557433 SLC2A8Q9NY64 477 aa14.72□□□□□ -0.05
SHMT2-231ENST00000557433 RAB19A4D1S5 217 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 K7EQS6 105 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 KDM4BO94953 1096 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 CYB5AP00167 134 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 ICAM2P13598 275 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 CCKBRP32239 447 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 UBE2MP61081 183 aaKnown RBP14.71□□□□□ -0.05
SHMT2-231ENST00000557433 PRTGQ2VWP7 1150 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 PHF19Q5T6S3 580 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 COL13A1Q5TAT6 717 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-231ENST00000557433 YOD1Q5VVQ6 348 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-231ENST00000557433 C11orf87Q6NUJ2 197 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 JMJD6Q6NYC1 403 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-231ENST00000557433 KCTD18Q6PI47 426 aaPredicted RBP14.71□□□□□ -0.05
SHMT2-231ENST00000557433 SHISA5Q8N114 240 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 OR51A4Q8NGJ6 313 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 SLC25A28Q96A46 364 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 CHST6Q9GZX3 395 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 ELOVL3Q9HB03 270 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 TAS2R3Q9NYW6 316 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 DHDHQ9UQ10 334 aa14.71□□□□□ -0.05
SHMT2-231ENST00000557433 A0A1B0GTH9 108 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 DISC1C4P0D8 188 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 SCDO00767 359 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 XKRYO14609 159 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ZNF264O43296 627 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 F13BP05160 661 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 HTR2CP28335 458 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 CD34P28906 385 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 PGDP52209 483 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ALG11Q2TAA5 492 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 TMEM196Q5HYL7 178 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 PABPC1L2AQ5JQF8 200 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 TMEM225Q6GV28 225 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ARMC6Q6NXE6 501 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ACOT7LQ6ZUV0 252 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ADGRE4PQ86SQ3 457 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ZNF615Q8N8J6 731 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 OR8K3Q8NH51 312 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 LRRC46Q96FV0 321 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 SLC41A2Q96JW4 573 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 PRRT1Q99946 306 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 MRTO4Q9UKD2 239 aaKnown RBP14.7□□□□□ -0.06
SHMT2-231ENST00000557433 KCNK7Q9Y2U2 307 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 PRELID3BQ9Y3B1 194 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 NUDT19A8MXV4 375 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ZNF736B4DX44 427 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-231ENST00000557433 HRKO00198 91 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 IL33O95760 270 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 MST1P26927 711 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 SEC13P55735 322 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 HSD17B7P56937 341 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 EGR4Q05215 589 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 SERTAD2Q14140 314 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 FAHD2BQ6P2I3 314 aaPredicted RBP14.7□□□□□ -0.06
SHMT2-231ENST00000557433 OR1J4Q8NGS1 313 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 OR8S1Q8NH09 359 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 GPBAR1Q8TDU6 330 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 FAHD2AQ96GK7 314 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ADAM19Q9H013 955 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 S1PR5Q9H228 398 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 ZNF346Q9UL40 294 aaKnown RBP14.7□□□□□ -0.06
SHMT2-231ENST00000557433 PLEKHA6Q9Y2H5 1048 aa14.7□□□□□ -0.06
SHMT2-231ENST00000557433 OR14I1A6ND48 311 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 C4orf47A7E2U8 309 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 TGFBR3LH3BV60 316 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 EIF1AYO14602 144 aaKnown RBP14.69□□□□□ -0.06
SHMT2-231ENST00000557433 MT-ATP6P00846 226 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 AMY2AP04746 511 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 GP1BAP07359 652 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 IGFBP3P17936 291 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-231ENST00000557433 RAB6AP20340 208 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 TACR3P29371 465 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 EIF1AXP47813 144 aaKnown RBP14.69□□□□□ -0.06
SHMT2-231ENST00000557433 MC2RQ01718 297 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 MEP1BQ16820 701 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 PAN3Q58A45 887 aaKnown RBP14.69□□□□□ -0.06
SHMT2-231ENST00000557433 PDSS1Q5T2R2 415 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 ATPAF1Q5TC12 328 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-231ENST00000557433 RAB12Q6IQ22 244 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 BIVMQ86UB2 503 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 ZDHHC22Q8N966 263 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 PHOSPHO1Q8TCT1 267 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 FOXRED1Q96CU9 486 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-231ENST00000557433 NPAS1Q99742 590 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 NKX6-2Q9C056 277 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-231ENST00000557433 LAT2Q9GZY6 243 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 SYT4Q9H2B2 425 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 STARD5Q9NSY2 213 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 DZANK1Q9NVP4 752 aa14.69□□□□□ -0.06
SHMT2-231ENST00000557433 PURGQ9UJV8 347 aaKnown RBP14.69□□□□□ -0.06
SHMT2-231ENST00000557433 TNFP01375 233 aa14.68□□□□□ -0.06
SHMT2-231ENST00000557433 H2AFB1P0C5Y9 115 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms