RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 SLC25A37Q9NYZ2 338 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 EGFL7Q9UHF1 273 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 TRIM33Q9UPN9 1127 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 NPTNQ9Y639 398 aa10.39□□□□□ -0.75
SNX6-209ENST00000557265 C5orf49A4QMS7 147 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 CLDN34H7C241 214 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 UBDO15205 165 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 SERPINB7O75635 380 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 IGHG1P01857 330 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 IGHMP01871 453 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 HIST1H2ABP04908 130 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 ZNF12P17014 697 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 OMGP23515 440 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 PCGF2P35227 344 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 RBMXP38159 391 aaKnown RBP10.38□□□□□ -0.75
SNX6-209ENST00000557265 HIST3H3Q16695 136 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 ZNF613Q6PF04 617 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 HIST3H2AQ7L7L0 130 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 ARMC8Q8IUR7 673 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 MSRB3Q8IXL7 192 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 HIPK4Q8NE63 616 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 SLC25A40Q8TBP6 338 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 KLF14Q8TD94 323 aaPredicted RBP10.38□□□□□ -0.75
SNX6-209ENST00000557265 HIST1H2ACQ93077 130 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 OR52B2Q96RD2 323 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 ZNF607Q96SK3 696 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 MRI1Q9BV20 369 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 MS4A7Q9GZW8 240 aaPredicted RBP10.38□□□□□ -0.75
SNX6-209ENST00000557265 KCNN2Q9H2S1 579 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 CENPHQ9H3R5 247 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 NANSQ9NR45 359 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 CYSLTR2Q9NS75 346 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 SLAMF8Q9P0V8 285 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 EIF3KQ9UBQ5 218 aaKnown RBP10.38□□□□□ -0.75
SNX6-209ENST00000557265 POLR3KQ9Y2Y1 108 aaPredicted RBP10.38□□□□□ -0.75
SNX6-209ENST00000557265 INSIG2Q9Y5U4 225 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 SOX21Q9Y651 276 aaPredicted RBP10.38□□□□□ -0.75
SNX6-209ENST00000557265 ARHGAP32A7KAX9 2087 aa10.38□□□□□ -0.75
SNX6-209ENST00000557265 LOC100509620A0A075B734 347 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 IGHV3OR16-10A0A075B7F0 116 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 M0R3H8 397 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 KPNA4O00629 521 aaPredicted RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 CHP2O43745 196 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 SNNO75324 88 aaPredicted RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 IGHV2-70P01814 119 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 ADH4P08319 380 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 SLC6A2P23975 617 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 CDAP32320 146 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 SLC6A9P48067 706 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 SEC61A1P61619 476 aaKnown RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 SRSF4Q08170 494 aaKnown RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 SCARB2Q14108 478 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 MBNL2Q5VZF2 373 aaKnown RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 TTC33Q6PID6 262 aaPredicted RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 UNQ6126/PRO20091Q6UXV3 157 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 MAVSQ7Z434 540 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 JAZF1Q86VZ6 243 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 KLHL36Q8N4N3 616 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 SPICQ8N5J4 248 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 ANKRD42Q8N9B4 389 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 SMYD1Q8NB12 490 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 BHLHE22Q8NFJ8 381 aaPredicted RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 OR52E2Q8NGJ4 325 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 TMIGD2Q96BF3 282 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 ZBTB9Q96C00 473 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 POM121L2Q96KW2 1035 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 DIRC2Q96SL1 478 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 MRPL13Q9BYD1 178 aaKnown RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 OR2J1Q9GZK6 312 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 EVA1AQ9H8M9 152 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 SIAEQ9HAT2 523 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 PATZ1Q9HBE1 687 aaKnown RBP10.37□□□□□ -0.75
SNX6-209ENST00000557265 MSL2Q9HCI7 577 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 CCNB1IP1Q9NPC3 277 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 SLCO1B3Q9NPD5 702 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 KLHL21Q9UJP4 597 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 ZNF229Q9UJW7 825 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 ZDHHC8Q9ULC8 765 aa10.37□□□□□ -0.75
SNX6-209ENST00000557265 CPSF4LA6NMK7 179 aaKnown RBP10.36□□□□□ -0.75
SNX6-209ENST00000557265 BLOC1S5-TXNDC5H3BN57 136 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 FMO6PO60774 539 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 LYPD3O95274 346 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 GPANK1O95872 356 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 THY1P04216 161 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 CD55P08174 381 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 ASAH2BP0C7U1 165 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 IGHV4-38-2P0DP08 117 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 UMPSP11172 480 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 ZNF32P17041 273 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 LIPAP38571 399 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 MTNR1AP48039 350 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 GDI2P50395 445 aaKnown RBP10.36□□□□□ -0.75
SNX6-209ENST00000557265 TNFAIP6P98066 277 aaPredicted RBP10.36□□□□□ -0.75
SNX6-209ENST00000557265 OCLNQ16625 522 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 LRIF1Q5T3J3 769 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 C16orf87Q6PH81 154 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 RFPL4BQ6ZWI9 263 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 SPATC1Q76KD6 591 aa10.36□□□□□ -0.75
SNX6-209ENST00000557265 LRRC28Q86X40 367 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms