RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 ZNF557Q8N988 423 aaPredicted RBP0.82□□□□□ -2.28
SRP54-207ENST00000555535 FAM133AQ8N9E0 248 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 HSD17B11Q8NBQ5 300 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 SDR9C7Q8NEX9 313 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 OR2T3Q8NH03 318 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 MAGEE2Q8TD90 523 aaPredicted RBP0.82□□□□□ -2.28
SRP54-207ENST00000555535 TM4SF18Q96CE8 201 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 TSSK3Q96PN8 268 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 SORT1Q99523 831 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 GPA33Q99795 319 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 SULT4A1Q9BR01 284 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 ERP44Q9BS26 406 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 GON7Q9BXV9 100 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 EXD2Q9NVH0 621 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 PIPOXQ9P0Z9 390 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 SH3BGRL2Q9UJC5 107 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 CDH9Q9ULB4 789 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 CLEC4AQ9UMR7 237 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 FANCIQ9NVI1 1328 aa0.82□□□□□ -2.28
SRP54-207ENST00000555535 ZNF726A6NNF4 738 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 H0YCG3 227 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 GOLGA8SH3BPF8 625 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 J3QRE1 110 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 GOSR2O14653 212 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 GMFGO60234 142 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 MGRN1O60291 552 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 TBX19O60806 448 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 MTX2O75431 263 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 SCGNO76038 276 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 OR7A10O76100 309 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 UTS2O95399 124 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 CCNE2O96020 404 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 IGHG4P01861 327 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 FGGP02679 453 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 BCHEP06276 602 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 IQCF3P0C7M6 154 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 UBTFL6P0CB48 400 aaPredicted RBP0.81□□□□□ -2.28
SRP54-207ENST00000555535 FOLR1P15328 257 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 CD1CP29017 333 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 NPBWR2P48146 333 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 RFX3P48380 749 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 IFNAR2P48551 515 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 CRYBB1P53674 252 aaPredicted RBP0.81□□□□□ -2.28
SRP54-207ENST00000555535 NUTF2P61970 127 aaKnown RBP0.81□□□□□ -2.28
SRP54-207ENST00000555535 RCAN2Q14206 197 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 MESDQ14696 234 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 FILIP1LQ4L180 1135 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 SMUG1Q53HV7 270 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 CFAP157Q5JU67 520 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 C1orf220Q5T0J3 134 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 OR2A2Q6IF42 318 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 HCP5Q6MZN7 132 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 CEMP1Q6PRD7 247 aaPredicted RBP0.81□□□□□ -2.28
SRP54-207ENST00000555535 PLET1Q6UQ28 207 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 ZNF664Q8N3J9 261 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 STPG2Q8N412 459 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 CEP112Q8N8E3 955 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 ZFP41Q8N8Y5 198 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 VN1R2Q8NFZ6 395 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 OR5D13Q8NGL4 314 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 OR1L6Q8NGR2 347 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 OR1L4Q8NGR5 311 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 FGF14Q92915 247 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 FAM3DQ96BQ1 224 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 TRIM62Q9BVG3 475 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 OSBPL10Q9BXB5 764 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 RMND5AQ9H871 391 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 NMRAL1Q9HBL8 299 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 EPS15L1Q9UBC2 864 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 PSG8Q9UQ74 426 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 IKBKGQ9Y6K9 419 aa0.81□□□□□ -2.28
SRP54-207ENST00000555535 CENPJQ9HC77 1338 aaPredicted RBP0.81□□□□□ -2.28
SRP54-207ENST00000555535 BRCA1P38398 1863 aaKnown RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 A0A1B0GWJ7 208 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 MBLAC1A4D2B0 266 aaPredicted RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 CCDC182A6NF36 153 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 GPR89AB7ZAQ6 455 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 L7N2F9 121 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 CCL21O00585 134 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 POLR1CO15160 346 aaPredicted RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 CHST1O43916 411 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 FCMRO60667 390 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 NOL3O60936 208 aaKnown RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 SNNO75324 88 aaPredicted RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 RDH16O75452 317 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 PALMO75781 387 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 AIFM1O95831 613 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 CLIC3O95833 236 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 IGHDP01880 384 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 CT62P0C5K7 136 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 GPR89BP0CG08 455 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 DESP17661 470 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 HRH1P35367 487 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 NAMPTP43490 491 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 CCT3P49368 545 aaKnown RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 DUSP3P51452 185 aaPredicted RBP0.8□□□□□ -2.28
SRP54-207ENST00000555535 ZNF92Q03936 586 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 PRKCDQ05655 676 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 TCP10Q12799 353 aa0.8□□□□□ -2.28
SRP54-207ENST00000555535 MRPL28Q13084 256 aaKnown RBP0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms