RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 PATL1Q86TB9 770 aaKnown RBP13.17□□□□□ -0.3
NEDD1-207ENST00000555114 LRRC18Q8N456 261 aa13.17□□□□□ -0.3
NEDD1-207ENST00000555114 RASSF5Q8WWW0 418 aa13.17□□□□□ -0.3
NEDD1-207ENST00000555114 C7orf26Q96N11 449 aa13.17□□□□□ -0.3
NEDD1-207ENST00000555114 ZNF347Q96SE7 839 aa13.17□□□□□ -0.3
NEDD1-207ENST00000555114 CPPED1Q9BRF8 314 aaPredicted RBP13.17□□□□□ -0.3
NEDD1-207ENST00000555114 RABEP2Q9H5N1 569 aa13.17□□□□□ -0.3
NEDD1-207ENST00000555114 IKZF5Q9H5V7 419 aa13.17□□□□□ -0.3
NEDD1-207ENST00000555114 CGGBP1Q9UFW8 167 aaPredicted RBP13.17□□□□□ -0.3
NEDD1-207ENST00000555114 SLC7A7Q9UM01 511 aa13.17□□□□□ -0.3
NEDD1-207ENST00000555114 GMNCA6NCL1 334 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 SPRY3O43610 288 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 FOXH1O75593 365 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 OPN1SWP03999 348 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 STOMP27105 288 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 ATP4BP51164 291 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 UBA52P62987 128 aaKnown RBP13.16□□□□□ -0.3
NEDD1-207ENST00000555114 NPTX1Q15818 432 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 HIST3H3Q16695 136 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 DUSP7Q16829 419 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 INTS11Q5TA45 600 aaKnown RBP13.16□□□□□ -0.3
NEDD1-207ENST00000555114 SHISA2Q6UWI4 295 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 LRRC17Q8N6Y2 441 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 VANGL1Q8TAA9 524 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-207ENST00000555114 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 ZMAT3Q9HA38 289 aaKnown RBP13.16□□□□□ -0.3
NEDD1-207ENST00000555114 SIAEQ9HAT2 523 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 UBAP1Q9NZ09 502 aa13.16□□□□□ -0.3
NEDD1-207ENST00000555114 LEF1Q9UJU2 399 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-207ENST00000555114 PPIAL4EA0A075B759 164 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 PPIAL4CA0A0B4J2A2 164 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 PPIAL4DF5H284 164 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 IGHV1-46P01743 117 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 MMP7P09237 267 aaPredicted RBP13.15□□□□□ -0.3
NEDD1-207ENST00000555114 PPIAL4FP0DN26 164 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 ACADSP16219 412 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 IDH3AP50213 366 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 GDI2P50395 445 aaKnown RBP13.15□□□□□ -0.3
NEDD1-207ENST00000555114 LCN2P80188 198 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 MRPS34P82930 218 aaKnown RBP13.15□□□□□ -0.3
NEDD1-207ENST00000555114 RUNDC3AQ59EK9 446 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 PABPC1L2AQ5JQF8 200 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 PRR31Q5SQ13 230 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 ZDHHC22Q8N966 263 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 SYT14Q8NB59 555 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 POP5Q969H6 163 aaKnown RBP13.15□□□□□ -0.3
NEDD1-207ENST00000555114 GPA33Q99795 319 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 ZNF426Q9BUY5 554 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 ZNF747Q9BV97 191 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 MRPL13Q9BYD1 178 aaKnown RBP13.15□□□□□ -0.3
NEDD1-207ENST00000555114 INIPQ9NRY2 104 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 ZDHHC8Q9ULC8 765 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 CACNG2Q9Y698 323 aa13.15□□□□□ -0.3
NEDD1-207ENST00000555114 C5orf49A4QMS7 147 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 H3BSA7 217 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 ZNF500O60304 480 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-207ENST00000555114 TRMUO75648 421 aaKnown RBP13.14□□□□□ -0.31
NEDD1-207ENST00000555114 MAKP20794 623 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-207ENST00000555114 ARHGDIAP52565 204 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 RPL18Q07020 188 aaKnown RBP13.14□□□□□ -0.31
NEDD1-207ENST00000555114 ARMCX4Q5H9R4 360 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 THEM4Q5T1C6 240 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 MBNL2Q5VZF2 373 aaKnown RBP13.14□□□□□ -0.31
NEDD1-207ENST00000555114 DLEU7Q6UYE1 221 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 ZER1Q7Z7L7 766 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 DHDDSQ86SQ9 333 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 PTOV1Q86YD1 416 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 ALDH16A1Q8IZ83 802 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 GPR32P1Q8NGA4 272 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 IPCEF1Q8WWN9 437 aaPredicted RBP13.14□□□□□ -0.31
NEDD1-207ENST00000555114 ASB10Q8WXI3 467 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 GTF3AQ92664 365 aaKnown RBP13.14□□□□□ -0.31
NEDD1-207ENST00000555114 SEPHS2Q99611 448 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 EBF4Q9BQW3 602 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 PCDHAC1Q9H158 963 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 ZNF696Q9H7X3 374 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 SMURF2Q9HAU4 748 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 ESM1Q9NQ30 184 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 NDUFAF1Q9Y375 327 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 PPIAL4AQ9Y536 164 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 PCDHGB1Q9Y5G3 927 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 TENM1Q9UKZ4 2725 aa13.14□□□□□ -0.31
NEDD1-207ENST00000555114 WNK2Q9Y3S1 2297 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 ANGPT2O15123 496 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 ERLIN1O75477 346 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 UBOX5O94941 541 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 LYPD3O95274 346 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 MT-ND1P03886 318 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 THY1P04216 161 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 F13BP05160 661 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 ADH4P08319 380 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 HKR1P10072 659 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 ZNF32P17041 273 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 FUT1P19526 365 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 RBM34P42696 430 aaKnown RBP13.13□□□□□ -0.31
NEDD1-207ENST00000555114 MMP15P51511 669 aa13.13□□□□□ -0.31
NEDD1-207ENST00000555114 ZNF133P52736 654 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms