RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 IGFL2Q6UWQ7 119 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RBMS3Q6XE24 437 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF621Q6ZSS3 439 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CDHR3Q6ZTQ4 885 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 AHSA2Q719I0 299 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LINGO2Q7L985 606 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CPEB2Q7Z5Q1 589 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 GPAT4Q86UL3 456 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC22A16Q86VW1 577 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CALHM1Q8IU99 346 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LAX1Q8IWV1 398 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 STX19Q8N4C7 294 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SPATA6LQ8N4H0 392 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC5A8Q8N695 610 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 C11orf44Q8N8P7 122 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 Q8N9G6 341 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FAM46DQ8NEK8 389 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 B3GNT7Q8NFL0 401 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LYPD6BQ8NI32 183 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 JOSD2Q8TAC2 188 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PYROXD1Q8WU10 500 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RNF133Q8WVZ7 376 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ASB15Q8WXK1 588 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 GCDHQ92947 438 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FAF2Q96CS3 445 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 POM121L2Q96KW2 1035 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CNBD2Q96M20 576 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 AMDHD1Q96NU7 426 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 IP6K3Q96PC2 410 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MTERF1Q99551 399 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TSNAXQ99598 290 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC35A5Q9BS91 424 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NMNAT2Q9BZQ4 307 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CCDC90BQ9GZT6 254 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PPIL3Q9H2H8 161 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ZBTB26Q9HCK0 441 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 HRASLSQ9HDD0 168 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 GPATCH2LQ9NWQ4 482 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RHCGQ9UBD6 479 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 XPR1Q9UBH6 696 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CDC42EP3Q9UKI2 254 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SH2B3Q9UQQ2 575 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OSGIN2Q9Y236 505 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FOXA2Q9Y261 457 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FARSAQ9Y285 508 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 BTRCQ9Y297 605 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OR1A2Q9Y585 309 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 UNC13CQ8NB66 2214 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 WDFY3Q8IZQ1 3526 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 KCNE1BA0A087WTH5 132 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LOC105369274A0A096LPK9 316 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LOC102723532A0A0G2JNH3 316 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FAM172BPA6NC97 362 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 B4DGG1 531 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LOC110117498-PIK3R3F6TDL0 507 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RNASEK-C17orf49H0YIS7 233 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC28A1O00337 649 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 RAB29O14966 203 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NKX2-8O15522 239 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CHP2O43745 196 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LCMT2O60294 686 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TPST1O60507 370 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CREG1O75629 220 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OR2F2O95006 317 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 WDPCPO95876 746 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 IFNA2P01563 188 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FAM157BP0CG42 384 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 COX4I1P13073 169 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TSPAN8P19075 237 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TCN2P20062 427 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FDXRP22570 491 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PPT1P50897 306 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CCL11P51671 97 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TEKQ02763 1124 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TNP2Q05952 138 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CD300CQ08708 224 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ASAH1Q13510 395 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 IL13RA2Q14627 380 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 PAFAH1B3Q15102 231 aaKnown RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NRF1Q16656 503 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 MEP1AQ16819 746 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SOHLH1Q5JUK2 328 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 FNBP1LQ5T0N5 605 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 C1QL3Q5VWW1 255 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ZNF770Q6IQ21 691 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 NIPAL1Q6NVV3 410 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ACSM6Q6P461 480 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ULK3Q6PHR2 472 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 BTNL3Q6UXE8 466 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 Q6ZPB1 254 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 ASB18Q6ZVZ8 466 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SLC16A13Q7RTY0 426 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 HSD11B1LQ7Z5J1 315 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 CLNKQ7Z7G1 428 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 TRAPPC5Q8IUR0 188 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 IGDCC3Q8IVU1 814 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 SIAH3Q8IW03 269 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 KLHDC8AQ8IYD2 350 aa2.43□□□□□ -2.02
PRPF39-206ENST00000554429 LRRC56Q8IYG6 542 aaPredicted RBP2.43□□□□□ -2.02
PRPF39-206ENST00000554429 OR4N4Q8N0Y3 316 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 607 ms