RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ZBTB9Q96C00 473 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 MARS2Q96GW9 593 aaKnown RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 MAELQ96JY0 434 aaKnown RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 DCLRE1CQ96SD1 692 aaKnown RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 PAIP2Q9BPZ3 127 aaKnown RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 MRI1Q9BV20 369 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM109Q9BVC6 243 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 SPATA5L1Q9BVQ7 753 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 OR2J1Q9GZK6 312 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 EGLN1Q9GZT9 426 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 MS4A7Q9GZW8 240 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 MSL2Q9HCI7 577 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 SSU72Q9NP77 194 aaKnown RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 EGFL7Q9UHF1 273 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 POLR3KQ9Y2Y1 108 aaPredicted RBP7.66□□□□□ -1.18
SYNE2-209ENST00000553308 INSIG2Q9Y5U4 225 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 NPTNQ9Y639 398 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 TRRAPQ9Y4A5 3859 aa7.66□□□□□ -1.18
SYNE2-209ENST00000553308 LOC100509620A0A075B734 347 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 KPNA4O00629 521 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-209ENST00000553308 RGS16O15492 202 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-209ENST00000553308 CHP2O43745 196 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 IGHG1P01857 330 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 THY1P04216 161 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 ADH4P08319 380 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 IGHV4-38-2P0DP08 117 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF32P17041 273 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 STOMP27105 288 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 CDAP32320 146 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 PCGF2P35227 344 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF84P51523 738 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 CLRN1P58418 232 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 SCARB2Q14108 478 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 HIST3H3Q16695 136 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 NRN1LQ496H8 165 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 HHATQ5VTY9 493 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 MBNL2Q5VZF2 373 aaKnown RBP7.65□□□□□ -1.18
SYNE2-209ENST00000553308 LINC00114Q6XXX2 140 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 PARP8Q8N3A8 854 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 GOLGA6L1Q8N7Z2 621 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 NOXO1Q8NFA2 376 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 AKR7LQ8NHP1 331 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 KLF14Q8TD94 323 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-209ENST00000553308 AENQ8WTP8 325 aaKnown RBP7.65□□□□□ -1.18
SYNE2-209ENST00000553308 WFDC12Q8WWY7 111 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 TMIGD2Q96BF3 282 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 POM121L2Q96KW2 1035 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 OR52B2Q96RD2 323 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 MCHR1Q99705 422 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 PATZ1Q9HBE1 687 aaKnown RBP7.65□□□□□ -1.18
SYNE2-209ENST00000553308 KCNK9Q9NPC2 374 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 NANSQ9NR45 359 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM106BQ9NUM4 274 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 PDP1Q9P0J1 537 aaPredicted RBP7.65□□□□□ -1.18
SYNE2-209ENST00000553308 SLAMF8Q9P0V8 285 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 SLC13A4Q9UKG4 626 aa7.65□□□□□ -1.18
SYNE2-209ENST00000553308 C5orf49A4QMS7 147 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 PRORSD1PA6NEY8 169 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 CPSF4LA6NMK7 179 aaKnown RBP7.64□□□□□ -1.19
SYNE2-209ENST00000553308 A8MXK9 166 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 F5H0A9 414 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-209ENST00000553308 UBDO15205 165 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 MGRN1O60291 552 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 SNNO75324 88 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-209ENST00000553308 LYPD3O95274 346 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 SLC2A10O95528 541 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 OPN1SWP03999 348 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 CD55P08174 381 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ASAH2BP0C7U1 165 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 UMPSP11172 480 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 SLC6A9P48067 706 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 TNFAIP6P98066 277 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ZMYND11Q15326 602 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 NPTX1Q15818 432 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 OCLNQ16625 522 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 TMEM155Q4W5P6 130 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 LRIF1Q5T3J3 769 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF613Q6PF04 617 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 C16orf87Q6PH81 154 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 TSPYL5Q86VY4 417 aaPredicted RBP7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ARMC8Q8IUR7 673 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 KLHL36Q8N4N3 616 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 SPICQ8N5J4 248 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ANKRD42Q8N9B4 389 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 SMYD1Q8NB12 490 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 HIPK4Q8NE63 616 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 OR52E2Q8NGJ4 325 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ABHD4Q8TB40 342 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 NABP1Q96AH0 204 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 DIRC2Q96SL1 478 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 SEPHS2Q99611 448 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ARHGDIGQ99819 225 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 MRPL13Q9BYD1 178 aaKnown RBP7.64□□□□□ -1.19
SYNE2-209ENST00000553308 IKZF5Q9H5V7 419 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 CCNB1IP1Q9NPC3 277 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 SLCO1B3Q9NPD5 702 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 CYSLTR2Q9NS75 346 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 THAP1Q9NVV9 213 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 VAPAQ9P0L0 249 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ARMCX1Q9P291 453 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms