RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 NID1P14543 1247 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 ITGB8P26012 769 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 FABP9Q0Z7S8 132 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 LIPIQ6XZB0 460 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 C19orf35Q6ZS72 473 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 RTL10Q7L3V2 364 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 OR4N5Q8IXE1 308 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 GOT1L1Q8NHS2 421 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-212ENST00000546744 SEC11CQ9BY50 192 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 GLIPR2Q9H4G4 154 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 MED20Q9H944 212 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 GHRLQ9UBU3 117 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 FTSJ1Q9UET6 329 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 H3BQ06 376 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-212ENST00000546744 SULT1A3P0DMM9 295 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 SULT1A4P0DMN0 295 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 GABRA1P14867 456 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF28P17035 718 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 NKX2-1P43699 371 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-212ENST00000546744 RAB11AP62491 216 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 MFSD12Q6NUT3 480 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 GPR174Q9BXC1 333 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 NKX2-4Q9H2Z4 354 aa11.77□□□□□ -0.53
PTCH1-212ENST00000546744 B4DGG1 531 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 GFYI3L273 518 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 PHOX2AO14813 284 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 CYB5BO43169 146 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 IQCF3P0C7M6 154 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 BLVRBP30043 206 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 PFN3P60673 137 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF626Q68DY1 528 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 SLC48A1Q6P1K1 146 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 FAHD2BQ6P2I3 314 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 ALKAL1Q6UXT8 129 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 ARHGEF39Q8N4T4 335 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 TEX19Q8NA77 164 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 OR4D6Q8NGJ1 314 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 OR5K2Q8NHB8 316 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 NANOS1Q8WY41 292 aaKnown RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 FAHD2AQ96GK7 314 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 KIRREL1Q96J84 757 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 KLF16Q9BXK1 252 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 DEFB126Q9BYW3 111 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 AK3Q9UIJ7 227 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 SLC5A10A0PJK1 596 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 C7orf66A4D0T2 115 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 TMEM235A6NFC5 223 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF264O43296 627 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 NQO2P16083 231 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 MAKP20794 623 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 SERPINA2P20848 420 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 FBLP22087 321 aaKnown RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 RPS18P62269 152 aaKnown RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 UBXN2BQ14CS0 331 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 LIPNQ5VXI9 398 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 TMEM71Q6P5X7 295 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 HTR3DQ70Z44 454 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 OR2W3Q7Z3T1 314 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 EXD3Q8N9H8 876 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 UBAC2Q8NBM4 344 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 ASH2LQ9UBL3 628 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 TRAV36DV7A0A075B6V5 113 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 GALR3O60755 368 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 DTYMKP23919 212 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 S100A7P31151 101 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 SNRPEP62304 92 aaKnown RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 AKR1C1Q04828 323 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 MANEAQ5SRI9 462 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 TMPPEQ6ZT21 453 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF595Q8IYB9 648 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 TCEAL8Q8IYN2 117 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 PNPLA1Q8N8W4 532 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 BPIFCQ8NFQ6 507 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 GPR137Q96N19 417 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 NKX3-1Q99801 234 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-212ENST00000546744 IKZF5Q9H5V7 419 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 CUTCQ9NTM9 273 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 MED9Q9NWA0 146 aa11.76□□□□□ -0.53
PTCH1-212ENST00000546744 SBF1O95248 1867 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 A0A0U1RQK1 487 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 SERTM1A2A2V5 107 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 PRAMEF27A3QJZ7 478 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 OR6C68A6NDL8 312 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF888P0CJ79 500 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 EPHA1P21709 976 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 RGRP47804 291 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 P2RX1P51575 399 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 PCBP4P57723 403 aaKnown RBP11.75□□□□□ -0.53
PTCH1-212ENST00000546744 HOXC5Q00444 222 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 PMPCAQ10713 525 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 PRSS36Q5K4E3 855 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 PRAMEF9Q5VWM5 478 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 FAM185AQ8N0U4 392 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 PGBD5Q8N414 524 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 ZNF75AQ96N20 296 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 ARV1Q9H2C2 271 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 IGFLR1Q9H665 355 aa11.75□□□□□ -0.53
PTCH1-212ENST00000546744 GCM1Q9NP62 436 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms