RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 KLHL36Q8N4N3 616 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 SPICQ8N5J4 248 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 C10orf53Q8N6V4 93 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 RBM15BQ8NDT2 890 aaKnown RBP10.72□□□□□ -0.69
SCAF11-208ENST00000546534 OR6X1Q8NH79 312 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 VPS33AQ96AX1 596 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 MARS2Q96GW9 593 aaKnown RBP10.72□□□□□ -0.69
SCAF11-208ENST00000546534 DIRC2Q96SL1 478 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 BCL2L10Q9HD36 194 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 THUMPD1Q9NXG2 353 aaKnown RBP10.72□□□□□ -0.69
SCAF11-208ENST00000546534 CMYA5Q8N3K9 4069 aa10.72□□□□□ -0.69
SCAF11-208ENST00000546534 SERPINE1P05121 402 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 ZCCHC18P0CG32 403 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 ADORA3P0DMS8 318 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 CCNOP22674 350 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 APLNRP35414 380 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 WNT5AP41221 380 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 FAM91A1Q658Y4 838 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 LRRC28Q86X40 367 aaPredicted RBP10.71□□□□□ -0.69
SCAF11-208ENST00000546534 OR5J2Q8NH18 312 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 BBS10Q8TAM1 723 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 KLF14Q8TD94 323 aaPredicted RBP10.71□□□□□ -0.69
SCAF11-208ENST00000546534 MAL2Q969L2 176 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 UBE2FQ969M7 185 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 ZNF566Q969W8 418 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 ZBTB18Q99592 522 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 MEAF6Q9HAF1 191 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 TNFRSF19Q9NS68 423 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 C1RLQ9NZP8 487 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 KLHL21Q9UJP4 597 aa10.71□□□□□ -0.69
SCAF11-208ENST00000546534 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.71□□□□□ -0.69
SCAF11-208ENST00000546534 NBEAL2Q6ZNJ1 2754 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 WDR91A4D1P6 747 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 F5H0A9 414 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-208ENST00000546534 TPST1O60507 370 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 ANP32DO95626 131 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 NGFP01138 241 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 CRYBA1P05813 215 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 CD55P08174 381 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 MMP7P09237 267 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-208ENST00000546534 QDPRP09417 244 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 PRKAR1BP31321 381 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 PAX2Q02962 417 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 HSF2Q03933 536 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 MELKQ14680 651 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 ZMYND11Q15326 602 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 OR1Q1Q15612 314 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 DEFB112Q30KQ8 113 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 TMEM155Q4W5P6 130 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 ESCO2Q56NI9 601 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 MBNL2Q5VZF2 373 aaKnown RBP10.7□□□□□ -0.7
SCAF11-208ENST00000546534 FIP1L1Q6UN15 594 aaKnown RBP10.7□□□□□ -0.7
SCAF11-208ENST00000546534 LRRC18Q8N456 261 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 SLC25A40Q8TBP6 338 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 UPRTQ96BW1 309 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 SLC25A44Q96H78 314 aaPredicted RBP10.7□□□□□ -0.7
SCAF11-208ENST00000546534 SORT1Q99523 831 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 OR2J1Q9GZK6 312 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 MSL2Q9HCI7 577 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 A4GALTQ9NPC4 353 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 CYSLTR2Q9NS75 346 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 TMEM106BQ9NUM4 274 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 SELENONQ9NZV5 590 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 OR5V1Q9UGF6 321 aa10.7□□□□□ -0.7
SCAF11-208ENST00000546534 LOC100509620A0A075B734 347 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 TRAV40A0A0B4J280 105 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 A0A0B4J2E0 115 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 A0A1B0GX12 115 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 CLPSL1A2RUU4 121 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 TYROBPO43914 113 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 NDUFA7O95182 113 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 IL6P05231 212 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 PGA4P0DJD7 388 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 PGA3P0DJD8 388 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 SELEP16581 610 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 STOMP27105 288 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 CDH12P55289 794 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 BTG1P62324 171 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 TNFAIP6P98066 277 aaPredicted RBP10.69□□□□□ -0.7
SCAF11-208ENST00000546534 RGNQ15493 299 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 NRN1LQ496H8 165 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 DHRS4L2Q6PKH6 230 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 ZNF283Q8N7M2 679 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 POM121L2Q96KW2 1035 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 WFDC6Q9BQY6 131 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 TMEM43Q9BTV4 400 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 MARCH7Q9H992 704 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 TMEM27Q9HBJ8 222 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 PNPOQ9NVS9 261 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 TAS2R5Q9NYW4 299 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 EIF3KQ9UBQ5 218 aaKnown RBP10.69□□□□□ -0.7
SCAF11-208ENST00000546534 IL20RAQ9UHF4 553 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 LGALS13Q9UHV8 139 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 ZDHHC8Q9ULC8 765 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 TRIM33Q9UPN9 1127 aa10.69□□□□□ -0.7
SCAF11-208ENST00000546534 TANC2Q9HCD6 1990 aa10.68□□□□□ -0.7
SCAF11-208ENST00000546534 C5orf49A4QMS7 147 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms