RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CXorf65A6NEN9 183 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 NPIPB15A6NHN6 443 aaPredicted RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 SLC38A8A6NNN8 435 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 RPL36A-HNRNPH2H7BZ11 118 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PLPP1O14494 284 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 TXNL1O43396 289 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 DOK2O60496 412 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PSPNO60542 156 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 NDUFS6O75380 124 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 PRKRAO75569 313 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 DUS4LO95620 317 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 RAB3DO95716 219 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PTBP3O95758 552 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 POMCP01189 267 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 RPN2P04844 631 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 CRHP06850 196 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 CD63P08962 238 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 SFTA3P0C7M3 94 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 RNH1P13489 461 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 HPGDP15428 266 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 CSRP1P21291 193 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 ZBTB25P24278 435 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 ITPKBP27987 946 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 CORO1AP31146 461 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 KIR2DL1P43626 348 aaPredicted RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 KIR2DL2P43627 348 aaPredicted RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 DIO1P49895 249 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PPT1P50897 306 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 SLC26A5P58743 744 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 HSD11B2P80365 405 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 DUSP8Q13202 625 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 DHRS2Q13268 280 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 CRMP1Q14194 572 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 GRB14Q14449 540 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 TAF13Q15543 124 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 MST1LQ2TV78 715 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PLEKHN1Q494U1 663 aaPredicted RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 CTXN3Q4LDR2 81 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PIP5KL1Q5T9C9 394 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PRAMEF17Q5VTA0 474 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 BTNL8Q6UX41 500 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 ESPNLQ6ZVH7 1005 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 SLC29A4Q7RTT9 530 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 C9orf40Q8IXQ3 194 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 SLC35F2Q8IXU6 374 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 ZNF595Q8IYB9 648 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 IZUMO1Q8IYV9 350 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 GABRG1Q8N1C3 465 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 KDM8Q8N371 416 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 ARL14EPQ8N8R7 260 aaPredicted RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 LFNGQ8NES3 379 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 OR4K14Q8NGD5 310 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 OR51S1Q8NGJ8 323 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 OR2G2Q8NGZ5 317 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PAQR8Q8TEZ7 354 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 DUSP19Q8WTR2 217 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 SNX33Q8WV41 574 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PPP1R1CQ8WVI7 109 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 TMEM239Q8WW34 195 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 AUTS2Q8WXX7 1259 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 C14orf144Q96I85 54 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 LINC00615Q96LM1 132 aaPredicted RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 ZNF75AQ96N20 296 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 SCGB3A2Q96PL1 93 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 OR14A2Q96R54 314 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 F2RL3Q96RI0 385 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 CCNL2Q96S94 520 aaPredicted RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 GFI1Q99684 422 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 MICU1Q9BPX6 476 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 WFDC6Q9BQY6 131 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 ZNF559Q9BR84 538 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 NUDT16L1Q9BRJ7 211 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 G6PC3Q9BUM1 346 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 ACTRT3Q9BYD9 372 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 METTL9Q9H1A3 318 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 ATG5Q9H1Y0 275 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 POFUT1Q9H488 388 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 KCNK12Q9HB15 430 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 MRPS30Q9NP92 439 aaKnown RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 ANKRD10Q9NXR5 420 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PRR13Q9NZ81 148 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 SPG21Q9NZD8 308 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 CLEC4AQ9UMR7 237 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 MOKQ9UQ07 419 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 SIGLEC7Q9Y286 467 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PRG3Q9Y2Y8 225 aaPredicted RBP6.07□□□□□ -1.44
USP28-207ENST00000538475 MED31Q9Y3C7 131 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 FAM96BQ9Y3D0 163 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 OR10H1Q9Y4A9 318 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 PCDHGA1Q9Y5H4 931 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 MTCH2Q9Y6C9 303 aa6.07□□□□□ -1.44
USP28-207ENST00000538475 MPDZO75970 2070 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 COL4A2P08572 1712 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 A0A087WWC5 75 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 TSPAN11A1L157 253 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 C7orf77A4D0Y5 90 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 ZNF840PA6NDX5 716 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 OR6C76A6NM76 312 aa6.06□□□□□ -1.44
USP28-207ENST00000538475 CPSF4LA6NMK7 179 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms