RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 NPHS2Q9NP85 383 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 TAS2R5Q9NYW4 299 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 SLC25A37Q9NYZ2 338 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 TRIM33Q9UPN9 1127 aa11.84□□□□□ -0.51
SMARCA4-206ENST00000538456 PPIAL4EA0A075B759 164 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 IGHV3OR16-10A0A075B7F0 116 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 PPIAL4CA0A0B4J2A2 164 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 PRORSD1PA6NEY8 169 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 POM121CA8CG34 1229 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 PPIAL4DF5H284 164 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 TRAPPC2LH3BP13 241 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 M0R3H8 397 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 UBDO15205 165 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 IGHG1P01857 330 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 IGHMP01871 453 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MMP7P09237 267 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 SBK2P0C263 348 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 PPIAL4FP0DN26 164 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MDKP21741 143 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 OMGP23515 440 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 STOMP27105 288 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 WNT5AP41221 380 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 ZNF84P51523 738 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 SEC61A1P61619 476 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 SCARB2Q14108 478 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 SLC9A3R2Q15599 337 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 ZNF74Q16587 644 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 ZNF718Q3SXZ3 478 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 HHATQ5VTY9 493 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MAVSQ7Z434 540 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 JAZF1Q86VZ6 243 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 ARMC8Q8IUR7 673 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MSRB3Q8IXL7 192 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 SMYD1Q8NB12 490 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 SYT14Q8NB59 555 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 SLC25A40Q8TBP6 338 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MCHR2Q969V1 340 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MARS2Q96GW9 593 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MAELQ96JY0 434 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 OR52B2Q96RD2 323 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MCHR1Q99705 422 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MRI1Q9BV20 369 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 MED4Q9NPJ6 270 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 NANSQ9NR45 359 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 THAP1Q9NVV9 213 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 NPTNQ9Y639 398 aa11.83□□□□□ -0.52
SMARCA4-206ENST00000538456 C5orf49A4QMS7 147 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 CPSF4LA6NMK7 179 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 CHP2O43745 196 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 UMPSP11172 480 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 CDAP32320 146 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 PCGF2P35227 344 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 RFPL4BQ6ZWI9 263 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 SPATC1Q76KD6 591 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 HIPK4Q8NE63 616 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 NOXO1Q8NFA2 376 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 KLF14Q8TD94 323 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 ZNF607Q96SK3 696 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 OR2J1Q9GZK6 312 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 MSL2Q9HCI7 577 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 CCNB1IP1Q9NPC3 277 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 SLAMF8Q9P0V8 285 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 EIF3KQ9UBQ5 218 aaKnown RBP11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 EGFL7Q9UHF1 273 aa11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 SOX21Q9Y651 276 aaPredicted RBP11.82□□□□□ -0.52
SMARCA4-206ENST00000538456 LOC100509620A0A075B734 347 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 MCIDASD6RGH6 385 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SNNO75324 88 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SERPINB7O75635 380 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SLC2A10O95528 541 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 GPANK1O95872 356 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 HIST1H2ABP04908 130 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 ZNF12P17014 697 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 ZNF32P17041 273 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SLC6A2P23975 617 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SRSF4Q08170 494 aaKnown RBP11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 NRN1LQ496H8 165 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 ZNF613Q6PF04 617 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 TTC33Q6PID6 262 aaPredicted RBP11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 LINC00114Q6XXX2 140 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 HIST3H2AQ7L7L0 130 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 NANOGNBQ7Z5D8 188 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 CROCCP2Q86T23 111 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 KLHL36Q8N4N3 616 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SPICQ8N5J4 248 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 AKR7LQ8NHP1 331 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 ABHD4Q8TB40 342 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 HIST1H2ACQ93077 130 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SLITRK2Q9H156 845 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 KCNN2Q9H2S1 579 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 IKZF5Q9H5V7 419 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SLCO1B3Q9NPD5 702 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 SLC7A7Q9UM01 511 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 INSIG2Q9Y5U4 225 aa11.81□□□□□ -0.52
SMARCA4-206ENST00000538456 MDFIC2A0A1B0GVS7 189 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 BLOC1S5-TXNDC5H3BN57 136 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 CLDN34H7C241 214 aa11.8□□□□□ -0.52
SMARCA4-206ENST00000538456 OPN1SWP03999 348 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms