RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 RHNO1Q9BSD3 238 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 MRPL37Q9BZE1 423 aaKnown RBP12.3□□□□□ -0.44
UBE3B-206ENST00000536398 OR51B6Q9H340 312 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
UBE3B-206ENST00000536398 SIAEQ9HAT2 523 aa12.3□□□□□ -0.44
UBE3B-206ENST00000536398 STX18Q9P2W9 335 aaKnown RBP12.3□□□□□ -0.44
UBE3B-206ENST00000536398 FAM171A2A8MVW0 826 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 MGRN1O60291 552 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 CD14P08571 375 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 APEX1P27695 318 aaKnown RBP12.29□□□□□ -0.44
UBE3B-206ENST00000536398 PCSK6P29122 969 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 ANKDD1AQ495B1 522 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 SLC36A2Q495M3 483 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 NRN1LQ496H8 165 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 MESTQ5EB52 335 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 PABPC1L2AQ5JQF8 200 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 THEM4Q5T1C6 240 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 OTPQ5XKR4 325 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 TMEM53Q6P2H8 277 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 CLEC2AQ6UVW9 174 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 FAM122BQ7Z309 247 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 ZER1Q7Z7L7 766 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 ARIH2OSQ8N7S6 290 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 CPEB3Q8NE35 698 aaKnown RBP12.29□□□□□ -0.44
UBE3B-206ENST00000536398 AKR7LQ8NHP1 331 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 RASD2Q96D21 266 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 RSRC1Q96IZ7 334 aaKnown RBP12.29□□□□□ -0.44
UBE3B-206ENST00000536398 FOXN4Q96NZ1 517 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 RBP7Q96R05 134 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 SYT3Q9BQG1 590 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 SMURF2Q9HAU4 748 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 NDE1Q9NXR1 346 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 MYEF2Q9P2K5 600 aaKnown RBP12.29□□□□□ -0.44
UBE3B-206ENST00000536398 SIGLEC7Q9Y286 467 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 TMEM5Q9Y2B1 443 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 CMAHPQ9Y471 501 aa12.29□□□□□ -0.44
UBE3B-206ENST00000536398 FN1P02751 2386 aaKnown RBP12.29□□□□□ -0.44
UBE3B-206ENST00000536398 RTTNQ86VV8 2226 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 TEX13CA0A0J9YWL9 993 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 SLC22A23A1A5C7 686 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 UNC119BA6NIH7 251 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 A6NIZ1 184 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 INAFM1C9JVW0 142 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 GADD45GO95257 159 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 FABP3P05413 133 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 ADRA2AP08913 450 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 FAM157BP0CG42 384 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 ZNF32P17041 273 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 ITGA2P17301 1181 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 LAP3P28838 519 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 RRM2P31350 389 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 GLRXP35754 106 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 MNAT1P51948 309 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 RAP1BP61224 184 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 RAP1AP62834 184 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 MS4A2Q01362 244 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 GALK2Q01415 458 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 DBPQ10586 325 aaPredicted RBP12.28□□□□□ -0.44
UBE3B-206ENST00000536398 UGT2A3Q6UWM9 527 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 FAM168AQ92567 244 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 MRPL24Q96A35 216 aaKnown RBP12.28□□□□□ -0.44
UBE3B-206ENST00000536398 MCUR1Q96AQ8 359 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 IL1RAPQ9NPH3 570 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 GRHPRQ9UBQ7 328 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 ADAM21Q9UKJ8 722 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 SPEF1Q9Y4P9 236 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 IER3IP1Q9Y5U9 82 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 CR1P17927 2039 aa12.28□□□□□ -0.44
UBE3B-206ENST00000536398 TLN2Q9Y4G6 2542 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 A0A1W2PPL8 197 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 TCRBV5S2A0A599 114 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 VSTM5A8MXK1 200 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 ENTPD5O75356 428 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 NDUFB2O95178 105 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 ALDH3B1P43353 468 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 PPOXP50336 477 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 DSCR9P59020 149 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 ERVS71-1P61550 626 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 PSG4Q00888 419 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 MAD2L1BPQ15013 274 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-206ENST00000536398 CARTPTQ16568 116 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 SPATS1Q496A3 300 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 FAM27BQ5VT28 67 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 FAM205BPQ63HN1 556 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 FOXL2NBQ6ZUU3 175 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 DPPA2Q7Z7J5 298 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 ZDHHC21Q8IVQ6 265 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 CLPTM1LQ96KA5 538 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 ZNF570Q96NI8 536 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 TPK1Q9H3S4 243 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 EMC7Q9NPA0 242 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 NRIP3Q9NQ35 241 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 ACTR3BQ9P1U1 418 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 SLC7A8Q9UHI5 535 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 FBXL3Q9UKT7 428 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 AURKCQ9UQB9 309 aa12.27□□□□□ -0.45
UBE3B-206ENST00000536398 LOC100509620A0A075B734 347 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 IQCMA0A1B0GVH7 501 aa12.26□□□□□ -0.45
UBE3B-206ENST00000536398 PRSS37A4D1T9 235 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms