RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 EIF3KQ9UBQ5 218 aaKnown RBP11.87□□□□□ -0.51
LDLR-203ENST00000535915 CDV3Q9UKY7 258 aaKnown RBP11.87□□□□□ -0.51
LDLR-203ENST00000535915 U3KQ87 197 aa11.87□□□□□ -0.51
LDLR-203ENST00000535915 A0A1B0GUH1 482 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 PIAS2O75928 621 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 TOXO94900 526 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 GLSO94925 669 aaPredicted RBP11.86□□□□□ -0.51
LDLR-203ENST00000535915 SLC17A1Q14916 467 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 LINC00303Q3SY05 128 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 C1orf140Q5VVS0 124 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 OLFML2AQ68BL7 652 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 SHISA6Q6ZSJ9 500 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 LANCL3Q6ZV70 420 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 ADGRG3Q86Y34 549 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 DUSP19Q8WTR2 217 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 MCHR2Q969V1 340 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 EXPH5Q8NEV8 1989 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 A8MVM7 634 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 TPOP07202 933 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 MYF5P13349 255 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 MNDAP41218 407 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 RAD52P43351 418 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 ZNF81P51508 661 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 ADAM8P78325 824 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 INSM1Q01101 510 aaPredicted RBP11.86□□□□□ -0.51
LDLR-203ENST00000535915 ETFDHQ16134 617 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 SLC18B1Q6NT16 456 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 ZNF679Q8IYX0 411 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 D2HGDHQ8N465 521 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 OR51D1Q8NGF3 324 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 ZNF519Q8TB69 540 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 NXPE2Q96DL1 559 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 SEC22CQ9BRL7 303 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 OR11A1Q9GZK7 315 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 TXNIPQ9H3M7 391 aa11.86□□□□□ -0.51
LDLR-203ENST00000535915 ELF5Q9UKW6 265 aaPredicted RBP11.86□□□□□ -0.51
LDLR-203ENST00000535915 A0A1B0GX78 115 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 I3L521 148 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 MBTPS2O43462 519 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 XRCC3O43542 346 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 FBXO45P0C2W1 286 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 SSTR2P30874 369 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 MELKQ14680 651 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 LGALSLQ3ZCW2 172 aaPredicted RBP11.85□□□□□ -0.51
LDLR-203ENST00000535915 NLRC3Q7RTR2 1065 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 KRT77Q7Z794 578 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 ZNF680Q8NEM1 530 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 GPR119Q8TDV5 335 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 ASB17Q8WXJ9 295 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 CHIAQ9BZP6 476 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 MRPL22Q9NWU5 206 aaKnown RBP11.85□□□□□ -0.51
LDLR-203ENST00000535915 SLC22A13Q9Y226 551 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 PCP4L1A6NKN8 68 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 ATP6V1G2-DDX39BF2Z307 99 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 TSPAN4O14817 238 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 NUDT21O43809 227 aaKnown RBP11.85□□□□□ -0.51
LDLR-203ENST00000535915 FADS1O60427 444 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 NPIPB7O75200 414 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 RBBP9O75884 186 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 AHSA1O95433 338 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 CTLA4P16410 223 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 CSF2RBP32927 897 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 BLVRAP53004 296 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 SCAND1P57086 179 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 FOXL2P58012 376 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 OR5M10Q6IEU7 315 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 GRINAQ7Z429 371 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 OR8H3Q8N146 312 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 MEIOBQ8N635 442 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 PPP1R14AQ96A00 147 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 B3GNT2Q9NY97 397 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 CTSFQ9UBX1 484 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 ZNF69Q9UC07 566 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 NPTNQ9Y639 398 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 ADAMTS20P59510 1910 aa11.85□□□□□ -0.51
LDLR-203ENST00000535915 OR6C76A6NM76 312 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 DXOO77932 396 aaKnown RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 PNPP00491 289 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 ALDOBP05062 364 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 ITGA5P08648 1049 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 ANXA7P20073 488 aaKnown RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 CTAG1AP78358 180 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 COL28A1Q2UY09 1125 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 PCGF3Q3KNV8 242 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 OR7E24Q6IFN5 339 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 FDX2Q6P4F2 183 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 CARFQ8N187 725 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 RNF128Q8TEB7 428 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 THRSPQ92748 146 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 ZNF587Q96SQ5 575 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 PHF7Q9BWX1 381 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 FGF21Q9NSA1 209 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 VSX1Q9NZR4 365 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 PCDHGA5Q9Y5G8 931 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 IGLV1-36A0A0B4J1U3 117 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 IGHV3-20A0A0C4DH32 117 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 SLC22A23A1A5C7 686 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms