RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SARAFQ96BY9 339 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 MS4A6EQ96DS6 147 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 FAM117AQ9C073 453 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 DAPP1Q9UN19 280 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 MGST1P10620 155 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 HOXD11P31277 338 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 TRMT12Q53H54 448 aaKnown RBP16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 KLHDC8BQ8IXV7 354 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 ENTHD1Q8IYW4 607 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 SVBPQ8N300 66 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 CLDN22Q8N7P3 220 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 C15orf54Q8N8G6 183 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 PHYHIPQ92561 330 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 DVL3Q92997 716 aaPredicted RBP16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 SLC5A10A0PJK1 596 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 OR6C65A6NJZ3 312 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 NME2P22392 152 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 MYBPHQ13203 477 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 ZNF266Q14584 549 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 DUSP5Q16690 384 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 MITD1Q8WV92 249 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 C20orf27Q9GZN8 174 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 UBQLN3Q9H347 655 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 DUSP22Q9NRW4 184 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 SNX11Q9Y5W9 270 aa16.67■□□□□ 0.26
SFSWAP-203ENST00000535236 M0R082 166 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 HSF1Q00613 529 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 RELAQ04206 551 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 DBPQ10586 325 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 IAH1Q2TAA2 248 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 H2BFWTQ7Z2G1 175 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 NIPSNAP1Q9BPW8 284 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 GPR173Q9NS66 373 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 SLC16A6O15403 523 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 ELK1P19419 428 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 FAM74A1Q5RGS3 127 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 FAM199XQ6PEV8 388 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 LGI3Q8N145 548 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 RIMS4Q9H426 269 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 CRLF2Q9HC73 371 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 LOXL2Q9Y4K0 774 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 KLK4Q9Y5K2 254 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 OR51B4Q9Y5P0 310 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 CRYBG1Q9Y4K1 1723 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 GLB1P16278 677 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 POLR2IP36954 125 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 EMC6Q9BV81 110 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 HES7Q9BYE0 225 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 TIMM10BQ9Y5J6 103 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 C20orf202A1L168 122 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 NUPL2O15504 423 aaKnown RBP16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 SRMP19623 302 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 GNB1P62873 340 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 GNB2P62879 340 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 SLC30A7Q8NEW0 376 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 CHST8Q9H2A9 424 aa16.66■□□□□ 0.26
SFSWAP-203ENST00000535236 KIR2DS1A0A191URI9 304 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 TRAF3IP2O43734 574 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 GLAP06280 429 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 ADH4P08319 380 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 HMGA1P17096 107 aaKnown RBP16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 KIR2DS4P43632 304 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 KIR2DS1Q14954 304 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 KCNJ8Q15842 424 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 DEFB109BQ30KR1 87 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 CREB3L2Q70SY1 520 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 BCDIN3DQ7Z5W3 292 aaKnown RBP16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 OR52N1Q8NH53 320 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 UFSP2Q9NUQ7 469 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 DVL1O14640 695 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 RAB5CP51148 216 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 DVL1P1P54792 670 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 NLRP8Q86W28 1048 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 EGFL6Q8IUX8 553 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 BCORP1Q8N888 145 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 SUMF1Q8NBK3 374 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 OPA3Q9H6K4 179 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 PTTG3PQ9NZH4 202 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 KIAA1456Q9P272 454 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 CSF3P09919 207 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 ACHEP22303 614 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 CCR5P51681 352 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 IHHQ14623 411 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 TESK1Q15569 626 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 ALKAL2Q6UX46 152 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 WFDC8Q8IUA0 241 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 ZMAT3Q9HA38 289 aaKnown RBP16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 C19orf53Q9UNZ5 99 aaPredicted RBP16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 CITO14578 2027 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 SPRED3Q2MJR0 410 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 ZNF626Q68DY1 528 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 BATF2Q8N1L9 274 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 EMC7Q9NPA0 242 aa16.65■□□□□ 0.26
SFSWAP-203ENST00000535236 ARR3P36575 388 aa16.64■□□□□ 0.26
SFSWAP-203ENST00000535236 NPY4RP50391 375 aa16.64■□□□□ 0.26
SFSWAP-203ENST00000535236 M0R1B8 84 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 LGALS8O00214 317 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 TNFSF15O95150 251 aa16.64■□□□□ 0.25
SFSWAP-203ENST00000535236 GUSBP08236 651 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms