RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 ETFAP13804 333 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 HTR2AP28223 471 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 APLNRP35414 380 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 MDH2P40926 338 aaKnown RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 BIDP55957 195 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 TNFAIP6P98066 277 aaPredicted RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 PLP2Q04941 152 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 LRRC74AQ0VAA2 488 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 CDK5R2Q13319 367 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 PDCD4Q53EL6 469 aaKnown RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 ALG10BQ5I7T1 473 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 RPS26P11Q5JNZ5 115 aaPredicted RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 SPATA46Q5T0L3 261 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 FAM91A1Q658Y4 838 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 C1orf174Q8IYL3 243 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 RBM15BQ8NDT2 890 aaKnown RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 OR4K5Q8NGD3 323 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 SLC25A40Q8TBP6 338 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 DNAJA4Q8WW22 397 aaPredicted RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 DYRK2Q92630 601 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 THOC1Q96FV9 657 aaKnown RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 FAM71F1Q96KD3 344 aaPredicted RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 POM121L2Q96KW2 1035 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 TEX37Q96LM6 180 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 MOGAT1Q96PD6 335 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 EPYCQ99645 322 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 ARHGDIGQ99819 225 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 RHOXF2Q9BQY4 288 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 SSBP3Q9BWW4 388 aaPredicted RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 OR2J1Q9GZK6 312 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 A4GALTQ9NPC4 353 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 RPS6KB2Q9UBS0 482 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
NXF1-215ENST00000533440 PLXNB1O43157 2135 aa6.52□□□□□ -1.37
NXF1-215ENST00000533440 DOCK11Q5JSL3 2073 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 LOC100509620A0A075B734 347 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 H0YL77 283 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 TNFRSF13BO14836 293 aaPredicted RBP6.51□□□□□ -1.37
NXF1-215ENST00000533440 MGRN1O60291 552 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 GPR137BO60478 399 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 ICMTO60725 284 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 SERPINI2O75830 405 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 OPN1MWP04001 364 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 PGA4P0DJD7 388 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 PGA3P0DJD8 388 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 OPN1MW2P0DN77 364 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 OPN1MW3P0DN78 364 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 CCNOP22674 350 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 AHCYP23526 432 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 STOMP27105 288 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 IL12AP29459 219 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 LOXL3P58215 753 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 DSTNP60981 165 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 FAM189A2Q15884 450 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 HIST3H3Q16695 136 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 WHAMMP3Q1A5X7 153 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 ZMAT1Q5H9K5 638 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 MTX3Q5HYI7 312 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 VAX1Q5SQQ9 334 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 GPR157Q5UAW9 335 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 ULK3Q6PHR2 472 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 UNQ6126/PRO20091Q6UXV3 157 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 SLC35D2Q76EJ3 337 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 MUC20Q8N307 709 aaPredicted RBP6.51□□□□□ -1.37
NXF1-215ENST00000533440 ZSCAN4Q8NAM6 433 aaPredicted RBP6.51□□□□□ -1.37
NXF1-215ENST00000533440 OR5J2Q8NH18 312 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 MRAPQ8TCY5 172 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 SSMEM1Q8WWF3 244 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 ZNF566Q969W8 418 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 SLC47A1Q96FL8 570 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 SLC25A44Q96H78 314 aaPredicted RBP6.51□□□□□ -1.37
NXF1-215ENST00000533440 APOPT1Q96IL0 206 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 PPP1R36Q96LQ0 422 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 SLC19A3Q9BZV2 496 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 C16orf95Q9H693 158 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 NANOGQ9H9S0 305 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 PPCSQ9HAB8 311 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 MSL2Q9HCI7 577 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 BCL2L10Q9HD36 194 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 SLC17A7Q9P2U7 560 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 TRIM33Q9UPN9 1127 aa6.51□□□□□ -1.37
NXF1-215ENST00000533440 COL7A1Q02388 2944 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 A0A0B4J2E0 115 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 A0A1B0GX12 115 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 C11orf98E9PRG8 122 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 TMEM178BH3BS89 294 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 RFXANKO14593 260 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 MT-ATP6P00846 226 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 QDPRP09417 244 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 CSF1P09603 554 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 ADORA3P0DMS8 318 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 VSIG8P0DPA2 414 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 THRBP10828 461 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 LBPP18428 481 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 TNFRSF1AP19438 455 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 PRKAR1BP31321 381 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 CRATP43155 626 aa6.5□□□□□ -1.37
NXF1-215ENST00000533440 ZNF133P52736 654 aaPredicted RBP6.5□□□□□ -1.37
NXF1-215ENST00000533440 UFM1P61960 85 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms