RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 FGF14Q92915 247 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 ARL11Q969Q4 196 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 OR2A7Q96R45 310 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 GREB1Q4ZG55 1949 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 A0A0D9SG52 128 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 G3V3Y1 287 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 CDC42EP2O14613 210 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 SLC2A5P22732 501 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 NFYBP25208 207 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 AKR1C3P42330 323 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 CSNK1EP49674 416 aaKnown RBP16.33■□□□□ 0.2
LTBP3-210ENST00000528516 PPT1P50897 306 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 EFNB1P98172 346 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 KRBOX4Q5JUW0 171 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 C5orf46Q6UWT4 87 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 STEAP2Q8NFT2 490 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 EXOSC3Q9NQT5 275 aaKnown RBP16.33■□□□□ 0.2
LTBP3-210ENST00000528516 RASL12Q9NYN1 266 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 PRODH2Q9UF12 536 aa16.33■□□□□ 0.2
LTBP3-210ENST00000528516 IL5P05113 134 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 LSSP48449 732 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 ELFN2Q5R3F8 820 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 EIF4E3Q8N5X7 224 aaKnown RBP16.32■□□□□ 0.2
LTBP3-210ENST00000528516 OR10R2Q8NGX6 335 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 NR4A3Q92570 626 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 PTDSS2Q9BVG9 487 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 C20orf141Q9NUB4 165 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 LAMA3Q16787 3333 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 LINC00346Q8IVM7 164 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 OR51D1Q8NGF3 324 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 OR5D18Q8NGL1 313 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 CCDC107Q8WV48 283 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 TSPAN10Q9H1Z9 355 aaPredicted RBP16.32■□□□□ 0.2
LTBP3-210ENST00000528516 V9GY05 133 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 IGLV3-16A0A075B6K0 115 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 OR6C65A6NJZ3 312 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 NRG2O14511 850 aaPredicted RBP16.32■□□□□ 0.2
LTBP3-210ENST00000528516 RBMXL2O75526 392 aaKnown RBP16.32■□□□□ 0.2
LTBP3-210ENST00000528516 GP1BAP07359 652 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 ACTA2P62736 377 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 ACTG2P63267 376 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 SIRPAP78324 504 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 DHODHQ02127 395 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 C3orf49Q96BT1 292 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 C14orf79Q96F83 325 aa16.32■□□□□ 0.2
LTBP3-210ENST00000528516 CCDC86Q9H6F5 360 aaKnown RBP16.32■□□□□ 0.2
LTBP3-210ENST00000528516 SLC2A1P11166 492 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 SRMP19623 302 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 S100PP25815 95 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 AIMP2Q13155 320 aaKnown RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 KIR2DS3Q14952 304 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 C9orf152Q5JTZ5 239 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 ULK3Q6PHR2 472 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 OR4C16Q8NGL9 310 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 OR1J4Q8NGS1 313 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 ALG12Q9BV10 488 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 TCEAL2Q9H3H9 227 aaPredicted RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 HRH4Q9H3N8 390 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 ZNF230Q9UIE0 474 aaPredicted RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 ZNF346Q9UL40 294 aaKnown RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 ABCA7Q8IZY2 2146 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 S100A8P05109 93 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 GAAP10253 952 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 FRKP42685 505 aaPredicted RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 RUNX2Q13950 521 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 EIF2S3LQ2VIR3 472 aaKnown RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 LCN10Q6JVE6 187 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 ZNF584Q8IVC4 421 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 GLB1L2Q8IW92 636 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 PLPP7Q8NBV4 271 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 ACBD4Q8NC06 268 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 MRGPRX3Q96LB0 322 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 SDHAF3Q9NRP4 125 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 GDE1Q9NZC3 331 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 KCNK7Q9Y2U2 307 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 PCYT1BQ9Y5K3 369 aaPredicted RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 TTC28Q96AY4 2481 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 TEX13DA0A0J9YY54 714 aaPredicted RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 HTR3BO95264 441 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 ST6GAL1P15907 406 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 HIST1H1CP16403 213 aaKnown RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 MST1P26927 711 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 NPBWR1P48145 328 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 OR7A5Q15622 319 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 KCTD18Q6PI47 426 aaPredicted RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 WDSUB1Q8N9V3 476 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 OR13C3Q8NGS6 347 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 CST11Q9H112 138 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 SIRT3Q9NTG7 399 aaPredicted RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 DZANK1Q9NVP4 752 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 THAP10Q9P2Z0 257 aaPredicted RBP16.31■□□□□ 0.2
LTBP3-210ENST00000528516 DAPP1Q9UN19 280 aa16.31■□□□□ 0.2
LTBP3-210ENST00000528516 TAS2R20P59543 309 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 CDKN3Q16667 212 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 ELOVL3Q9HB03 270 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 UPB1Q9UBR1 384 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 ANKRD20A5PA0PJZ0 165 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 SGCBQ16585 318 aa16.3■□□□□ 0.2
LTBP3-210ENST00000528516 MEPEQ9NQ76 525 aaPredicted RBP16.3■□□□□ 0.2
LTBP3-210ENST00000528516 IFITM5A6NNB3 132 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms