RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 SIGLEC9Q9Y336 463 aa11.48□□□□□ -0.57
NKX3-1-202ENST00000523261 ENSAO43768 121 aaKnown RBP11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 TOX4O94842 621 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 MMP7P09237 267 aaPredicted RBP11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 NQO1P15559 274 aaKnown RBP11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 MMP16P51512 607 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 MTX3Q5HYI7 312 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 C6orf136Q5SQH8 315 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 LRFN4Q6PJG9 635 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 RFPL4BQ6ZWI9 263 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 SLC16A14Q7RTX9 510 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 SERPINA11Q86U17 422 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 ANKRD46Q86W74 232 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 PEX5LQ8IYB4 626 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 CLIP4Q8N3C7 705 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 RBM15BQ8NDT2 890 aaKnown RBP11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 OR8B3Q8NGG8 313 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 SLC38A4Q969I6 547 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 OR8B2Q96RD0 313 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 GLTPQ9NZD2 209 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 CLN8Q9UBY8 286 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 CHST2Q9Y4C5 530 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 PCDHGB5Q9Y5G0 923 aa11.47□□□□□ -0.57
NKX3-1-202ENST00000523261 IGKV1D-42A0A075B6H8 117 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 TRAV36DV7A0A075B6V5 113 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 ZNF879B4DU55 563 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 RNASEK-C17orf49H0YIS7 233 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 H3BSA7 217 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 PHYHO14832 338 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 PROCP04070 461 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 IGLL1P15814 213 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 TNFSF4P23510 183 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 GCAP28676 217 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 PPP1CBP62140 327 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 MAPK11Q15759 364 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 NSUN5P1Q3KNT7 163 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 LIN52Q52LA3 116 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 WDR25Q64LD2 544 aaPredicted RBP11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 C5orf46Q6UWT4 87 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 Q6ZR03 302 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 NLRC3Q7RTR2 1065 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 KLHDC1Q8N7A1 406 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 OR2Z1Q8NG97 314 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 OR52P1PQ8NH57 321 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 R3HDM4Q96D70 268 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 POM121L2Q96KW2 1035 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 RHOXF2Q9BQY4 288 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 GAR1Q9NY12 217 aaKnown RBP11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 KLHL14Q9P2G3 628 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 IL19Q9UHD0 177 aa11.46□□□□□ -0.57
NKX3-1-202ENST00000523261 EXOC1LA0A1B0GW35 172 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 TIMM8AO60220 97 aaPredicted RBP11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 CPSF4O95639 269 aaKnown RBP11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 G6PDP11413 515 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 STOMP27105 288 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 EPHA3P29320 983 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 CHI3L1P36222 383 aaPredicted RBP11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 BIDP55957 195 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 CLDN8P56748 225 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 HSF2Q03933 536 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 PUDPQ08623 228 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 COX10Q12887 443 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 PABPC1L2AQ5JQF8 200 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 RNF220Q5VTB9 566 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 PGBD2Q6P3X8 592 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 C11orf88Q6PI97 169 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 ZNF841Q6ZN19 808 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 C1orf122Q6ZSJ8 110 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 VASH1Q7L8A9 365 aaPredicted RBP11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 PTOV1Q86YD1 416 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 PIP4P2Q8N4L2 257 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 SCAIQ8N9R8 606 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 FNDC5Q8NAU1 212 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 SCCPDHQ8NBX0 429 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 OR8J2Q8NGG1 315 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 VANGL1Q8TAA9 524 aaPredicted RBP11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 ACMSDQ8TDX5 336 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 C3orf30Q96M34 536 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 WDFY2Q96P53 400 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 SLC35A5Q9BS91 424 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 GCM1Q9NP62 436 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 EIF3KQ9UBQ5 218 aaKnown RBP11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 U3KQK5 164 aa11.45□□□□□ -0.58
NKX3-1-202ENST00000523261 LOC100509620A0A075B734 347 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 PRSS51A0A1B0GVH4 220 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 C5orf49A4QMS7 147 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 BTBD17A6NE02 478 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 ZSCAN12O43309 604 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 SERPINI2O75830 405 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 FGF4P08620 206 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 NR2F1P10589 423 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 AHCYP23526 432 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 SLC6A2P23975 617 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 KRTAP10-11P60412 298 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 HOXC5Q00444 222 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 EMX1Q04741 257 aaPredicted RBP11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 PSG7Q13046 419 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 ZNF404Q494X3 552 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 UNQ6126/PRO20091Q6UXV3 157 aa11.44□□□□□ -0.58
NKX3-1-202ENST00000523261 PXKQ7Z7A4 578 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms