RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 RBMXL2O75526 392 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 NUDT14O95848 222 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 FCGR3AP08637 254 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CD1DP15813 335 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 PRPS1L1P21108 318 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 G0S2P27469 103 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 PTH2RP49190 550 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 GLUD2P49448 558 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 HNRNPA3P51991 378 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 SP4Q02446 784 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 SLC39A6Q13433 755 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 IL18R1Q13478 541 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 ABRAXAS2Q15018 415 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 MLF2Q15773 248 aaPredicted RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 BSXQ3C1V8 233 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 TECRLQ5HYJ1 363 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 VAX1Q5SQQ9 334 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 FAM219BQ5XKK7 198 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 METTL7BQ6UX53 244 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 NCCRP1Q6ZVX7 275 aaPredicted RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 YTHDF3Q7Z739 585 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 LACC1Q8IV20 430 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 PIANPQ8IYJ0 282 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 SVOPLQ8N434 492 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 TMEM251Q8N6I4 163 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 LFNGQ8NES3 379 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 OR10G8Q8NGN5 311 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 OR2G2Q8NGZ5 317 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 OR56B4Q8NH76 319 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 OR5AK3PQ8NH89 298 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 SPATA3Q8NHX4 192 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 C11orf45Q8TAV5 145 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 IFT81Q8WYA0 676 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 OR5P2Q8WZ92 322 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 FLYWCH2Q96CP2 140 aaKnown RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 ZNF486Q96H40 463 aaPredicted RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 POM121L2Q96KW2 1035 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 PACRGQ96M98 296 aaPredicted RBP3.33□□□□□ -1.88
SKP1-209ENST00000522552 LGMNQ99538 433 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 FOXC2Q99958 501 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 WDR41Q9HAD4 459 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 EBF2Q9HAK2 575 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 HRASLSQ9HDD0 168 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 ASCL3Q9NQ33 180 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CTPS2Q9NRF8 586 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 SDHAF2Q9NX18 166 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 RIMS3Q9UJD0 308 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 ING4Q9UNL4 249 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 L3MBTL1Q9Y468 752 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 CPQQ9Y646 472 aa3.33□□□□□ -1.88
SKP1-209ENST00000522552 ANKRD30BQ9BXX2 1392 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 LOC100131303A0A0U1RQF7 123 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 A0A1W2PQL4 384 aaPredicted RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 IGLON5A6NGN9 336 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 LOC110117498-PIK3R3F6TDL0 507 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 PGRMC1O00264 195 aaKnown RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 ERI3O43414 337 aaKnown RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 CEACAM4O75871 244 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 CIAO1O76071 339 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 GLUD1P00367 558 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 ORM1P02763 201 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 EDN1P05305 212 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 CD55P08174 381 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 HSPD1P10809 573 aaKnown RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 ZP3P21754 424 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 TUFMP49411 452 aaKnown RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 UGT2B15P54855 530 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 TAS2R60P59551 318 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 ERVS71-1P61550 626 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 TLE4Q04727 773 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 TRAF2Q12933 501 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 UNC119Q13432 240 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 FASTKQ14296 549 aaKnown RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 PDK2Q15119 407 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 RBMS2Q15434 407 aaKnown RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 MS4A13Q5J8X5 152 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 RESP18Q5W5W9 173 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 THOC7Q6I9Y2 204 aaKnown RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 ZNF790Q6PG37 636 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 DRAM2Q6UX65 266 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 RTL4Q6ZR62 310 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 LHFPL3Q86UP9 236 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 SLC13A5Q86YT5 568 aaPredicted RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 PRR22Q8IZ63 422 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 Q8N402 240 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 SAMD12Q8N8I0 201 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 ZNF740Q8NDX6 193 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 ZNF680Q8NEM1 530 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 KLHDC9Q8NEP7 349 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 ATP6V1C2Q8NEY4 427 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 PRSS3P2Q8NHM4 247 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 TFB1MQ8WVM0 346 aaKnown RBP3.32□□□□□ -1.88
SKP1-209ENST00000522552 PSMG2Q969U7 264 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 YIPF6Q96EC8 236 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 DYNLL2Q96FJ2 89 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 SEC22AQ96IW7 307 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 ST6GAL2Q96JF0 529 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 MCHR1Q99705 422 aa3.32□□□□□ -1.88
SKP1-209ENST00000522552 ATF6BQ99941 703 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms