RNA–Protein interactions for RNA: ENST00000517215.1

RNU6-1238P-201, Transcript of RNA, U6 small nuclear 1238, pseudogene, humanhuman

BASIC

Gene RNU6-1238P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1238P-201ENST00000517215 EIF1P41567 113 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CDKN2BP42772 138 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 HTR5AP47898 357 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SPINT3P49223 89 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ZNF80P51504 273 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CRYBB1P53674 252 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 MFAP3P55082 362 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 BIDP55957 195 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CDK5Q00535 292 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SLC3A1Q07837 685 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 EPS8Q12929 822 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TSTA3Q13630 321 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 KARSQ15046 597 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PON3Q15166 354 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ELOCQ15369 112 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RGNQ15493 299 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GFOD2Q3B7J2 385 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 NSUN5P1Q3KNT7 163 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LUZP6Q538Z0 58 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 MRPL2Q5T653 305 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TMEM154Q6P9G4 183 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CNSTQ6PJW8 725 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ARL9Q6T311 187 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 HACD2Q6Y1H2 254 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 NRARPQ7Z6K4 114 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RANBP3LQ86VV4 465 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 MYLK4Q86YV6 388 aaPredicted RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 BBS7Q8IWZ6 715 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 DIS3L2Q8IYB7 885 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 HS3ST5Q8IZT8 346 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 NUP93Q8N1F7 819 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SVOPLQ8N434 492 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LINC00471Q8N535 108 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 C3orf22Q8N5N4 141 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 OR52M1Q8NGK5 317 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PIFOQ8TCI5 191 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 HEXDCQ8WVB3 486 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 APH1AQ96BI3 265 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 UPRTQ96BW1 309 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FAHD2AQ96GK7 314 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 MS4A14Q96JA4 679 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PARK7Q99497 189 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TIMM17AQ99595 171 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PYM1Q9BRP8 204 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 KIFC1Q9BW19 673 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GABARAPL3Q9BY60 117 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LRRC2Q9BYS8 371 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 POLR1EQ9GZS1 481 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 OR10A4Q9H209 315 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LRRN3Q9H3W5 708 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SMARCAD1Q9H4L7 1026 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ECT2Q9H8V3 914 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PREBQ9HCU5 417 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 YAE1D1Q9NRH1 226 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PDRG1Q9NUG6 133 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RHBDL2Q9NX52 303 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 XCL2Q9UBD3 114 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PISDQ9UG56 409 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SEC63Q9UGP8 760 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TRAF3IP3Q9Y228 551 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FAM50BQ9Y247 325 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ACOT9Q9Y305 439 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 EXOSC1Q9Y3B2 195 aaKnown RBP-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 COL6A5A8TX70 2615 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PFASO15067 1338 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PEAK1Q9H792 1746 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LAMA1P25391 3075 aa-1.43□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CEMIPQ8WUJ3 1361 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 A0A087WX48 190 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 LOC102723996A0A087X1L8 192 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 A0A0J9YX75 114 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 HSFX4A0A1B0GTS1 333 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 HSFX3A0A1B0GWH4 333 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 A0A1W2PPW3 197 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GMNCA6NCL1 334 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GOLGA6CA6NDK9 693 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 GOLGA6BA6NDN3 693 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ZNF705FA8MVS1 300 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CLDN25C9JDP6 229 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 M0R296 226 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 DDX39AO00148 427 aaKnown RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TNFRSF11BO00300 401 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 FLRT2O43155 660 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 ST8SIA3O43173 380 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PPIHO43447 177 aaKnown RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 PLIN1O60240 522 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CDC40O60508 579 aaKnown RBP eCLIP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 TIMM17BO60830 172 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 HSPA4LO95757 839 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 SCGB1D2O95969 90 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CFDP00746 253 aaPredicted RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 IGF1P05019 195 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 RPSAP08865 295 aaKnown RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CT45A8P0DMV1 189 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CT45A9P0DMV2 189 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CCDC130P13994 396 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 EZRP15311 586 aaKnown RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 NELFEP18615 380 aaKnown RBP-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 AHCYP23526 432 aa-1.44□□□□□ -2.64
RNU6-1238P-201ENST00000517215 CD70P32970 193 aa-1.44□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms