RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PGA3P0DJD8 388 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 LIPCP11150 499 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 CEACAM1P13688 526 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 MYL9P24844 172 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 DCTDP32321 178 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 CD96P40200 585 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 DNASE1L1P49184 302 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 SUCLG1P53597 346 aaKnown RBP7.47□□□□□ -1.21
RNF4-220ENST00000513578 BIDP55957 195 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 RAC3P60763 192 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 PPP3R1P63098 170 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 RASGEF1BQ0VAM2 473 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 RIN1Q13671 783 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 MELKQ14680 651 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 HYAL4Q2M3T9 481 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 RGS21Q2M5E4 152 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 DDI2Q5TDH0 399 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 HBMQ6B0K9 141 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 TMEM225Q6GV28 225 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 ZNF544Q6NX49 715 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 SLC25A47Q6Q0C1 308 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 RPTNQ6XPR3 784 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 FOXL2NBQ6ZUU3 175 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 ESPNLQ6ZVH7 1005 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 TMPRSS7Q7RTY8 843 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 KDM8Q8N371 416 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 IL22RA1Q8N6P7 574 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 YIPF7Q8N8F6 280 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 NOXO1Q8NFA2 376 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 OR5M1Q8NGP8 315 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 RNF128Q8TEB7 428 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 TXNDC15Q96J42 360 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 CEP19Q96LK0 163 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 CMTM3Q96MX0 182 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 ATF6BQ99941 703 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 KCNS3Q9BQ31 491 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 SOSTQ9BQB4 213 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 UTP23Q9BRU9 249 aaKnown RBP7.47□□□□□ -1.21
RNF4-220ENST00000513578 MIXL1Q9H2W2 232 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 TPK1Q9H3S4 243 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 ASH1LQ9NR48 2969 aaKnown RBP7.47□□□□□ -1.21
RNF4-220ENST00000513578 DEPPQ9NTK1 212 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 LRFN1Q9P244 771 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 IL17BQ9UHF5 180 aa7.47□□□□□ -1.21
RNF4-220ENST00000513578 COA3Q9Y2R0 106 aaPredicted RBP7.47□□□□□ -1.21
RNF4-220ENST00000513578 MRPS18BQ9Y676 258 aaKnown RBP7.47□□□□□ -1.21
RNF4-220ENST00000513578 PHF3Q92576 2039 aaKnown RBP7.47□□□□□ -1.21
RNF4-220ENST00000513578 A0A0G2JK05 382 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 A0A0J9YW62 118 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 SPAARA0A1B0GVQ0 90 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 TMEM212A6NML5 194 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ZNF879B4DU55 563 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ZNF814B7Z6K7 855 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 MAGEB4O15481 346 aaPredicted RBP7.46□□□□□ -1.22
RNF4-220ENST00000513578 SLC19A2O60779 497 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 TMCC2O75069 709 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 HLA-DQA2P01906 255 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 OR8G3PP0DMU2 310 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ZNF823P16415 610 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ZNF43P17038 809 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 MAPK3P27361 379 aaPredicted RBP7.46□□□□□ -1.22
RNF4-220ENST00000513578 APEX1P27695 318 aaKnown RBP7.46□□□□□ -1.22
RNF4-220ENST00000513578 CALRP27797 417 aaKnown RBP7.46□□□□□ -1.22
RNF4-220ENST00000513578 LAP3P28838 519 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 SFTPDP35247 375 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 RRADP55042 308 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 NANOS3P60323 173 aaKnown RBP7.46□□□□□ -1.22
RNF4-220ENST00000513578 ADAM8P78325 824 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 IFITM3Q01628 133 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 MXD1Q05195 221 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 C19orf57Q0VDD7 668 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 INSL4Q14641 139 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 OXA1LQ15070 435 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ETFDHQ16134 617 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ST3GAL2Q16842 350 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 C10orf128Q5T292 105 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 RAET1LQ5VY80 246 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 CREB3L2Q70SY1 520 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 BTLAQ7Z6A9 289 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 GLB1L2Q8IW92 636 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 CLEC1AQ8NC01 280 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 MDS2Q8NDY4 140 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 OR2M7Q8NG81 312 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 OR2G2Q8NGZ5 317 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 OR52N5Q8NH56 324 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 OR5AK2Q8NH90 309 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ST7LQ8TDW4 575 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 THEM6Q8WUY1 208 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 TMEM54Q969K7 222 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 DNAJA3Q96EY1 480 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ADGRG7Q96K78 797 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 C4orf45Q96LM5 186 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 MRI1Q9BV20 369 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ABHD6Q9BV23 337 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 PPIL3Q9H2H8 161 aaKnown RBP7.46□□□□□ -1.22
RNF4-220ENST00000513578 TBCCD1Q9NVR7 557 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 MED29Q9NX70 200 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 SLCO1C1Q9NYB5 712 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 FRRS1LQ9P0K9 344 aa7.46□□□□□ -1.22
RNF4-220ENST00000513578 ABRACLQ9P1F3 81 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms