RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 SCD5Q86SK9 330 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 NAXDQ8IW45 347 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 NPWQ8N729 165 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 SEMA6DQ8NFY4 1073 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 FAM213BQ8TBF2 198 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 RAB40AQ8WXH6 277 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 L3HYPDHQ96EM0 354 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ZNF778Q96MU6 729 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ALG12Q9BV10 488 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 SPACA1Q9HBV2 294 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 ANKRD12Q6UB98 2062 aa5.32□□□□□ -1.56
USP38-203ENST00000511739 KIR2DS1A0A191URI9 304 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 LOC285095A0A1B0GVY8 99 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SLC22A20A6NK97 555 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 STMND1H3BQB6 276 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 XRCC2O43543 280 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SDC1P18827 310 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 CCR7P32248 378 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 IRS1P35568 1242 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 KIR2DS4P43632 304 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 PSMB3P49720 205 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 GABARAPL2P60520 117 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 FGFBP1Q14512 234 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 KIR2DS1Q14954 304 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 RNF113BQ8IZP6 322 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 FAM58AQ8N1B3 248 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SLC22A24Q8N4F4 322 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 DEFB124Q8NES8 71 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 GPR150Q8NGU9 434 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 PRR7Q8TB68 274 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 LINC01599Q8WXQ3 324 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 ELSPBP1Q96BH3 223 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TMEM181Q9P2C4 612 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 MMP17Q9ULZ9 603 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TRAV17A0A0B4J275 112 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 FADS1O60427 444 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 MITFO75030 526 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 NSA2O95478 260 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 TNFRSF1AP19438 455 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 APEX1P27695 318 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 OPRD1P41143 372 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 MRPL19P49406 292 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 MEOX1P50221 254 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 ZNF133P52736 654 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 TAS2R45P59539 299 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 PMPCAQ10713 525 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SYPL1Q16563 259 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 RPL22L1Q6P5R6 122 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 COMMD7Q86VX2 200 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 BATF2Q8N1L9 274 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 OR1M1Q8NGA1 313 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SPPL3Q8TCT6 385 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 THAP7Q9BT49 309 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 HDAC8Q9BY41 377 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 PLK3Q9H4B4 646 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 WDR76Q9H967 626 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 NECAP2Q9NVZ3 263 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 THAP10Q9P2Z0 257 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 ADAM29Q9UKF5 820 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TCFL5Q9UL49 500 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 RNF150Q9ULK6 438 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 RNF24Q9Y225 148 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 EVPLQ92817 2033 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 RPS10-NUDT3A0A1W2PQS6 291 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TNFRSF10AO00220 468 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TERTO14746 1132 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 AKR7A3O95154 331 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 VAMP5O95183 116 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 HLA-HP01893 362 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SLC35E2P0CK97 266 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 ZNF93P35789 620 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 RPS10P46783 165 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 CLINT1Q14677 625 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 RAB6CQ53S08 254 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 SYT6Q5T7P8 510 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 OR2A2Q6IF42 318 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 H1FNTQ75WM6 255 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 ADGRF3Q8IZF5 1079 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 LILRA2Q8N149 483 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 OR51A2Q8NGJ7 313 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 OR51H1Q8NH63 302 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 ST8SIA4Q92187 359 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 KHSRPQ92945 711 aaKnown RBP eCLIP5.31□□□□□ -1.561e-6■■■■□ 21.2
USP38-203ENST00000511739 UTP4Q969X6 686 aaKnown RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 SLC35A4Q96G79 324 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 PLSCR3Q9NRY6 295 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 FAM212BQ9NTI7 297 aaPredicted RBP5.31□□□□□ -1.56
USP38-203ENST00000511739 BABAM2Q9NXR7 383 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TIMM10BQ9Y5J6 103 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 TIMM9Q9Y5J7 89 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 C5orf49A4QMS7 147 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 LRRC3CA6NJW4 275 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 DRGXA6NNA5 263 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 GPRIN2O60269 458 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 PIAS2O75928 621 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 HPNP05981 417 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 CSF3P09919 207 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 FOLR1P15328 257 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 DTYMKP23919 212 aa5.31□□□□□ -1.56
USP38-203ENST00000511739 BPIFB3P59826 476 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms