RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 IGHG1P01857 330 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 IGHMP01871 453 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 MMP7P09237 267 aaPredicted RBP13.51□□□□□ -0.25
CXCL1-202ENST00000509101 MDKP21741 143 aaPredicted RBP13.51□□□□□ -0.25
CXCL1-202ENST00000509101 RBMXP38159 391 aaKnown RBP13.51□□□□□ -0.25
CXCL1-202ENST00000509101 WNT5AP41221 380 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF84P51523 738 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF154Q13106 437 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 SCARB2Q14108 478 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF74Q16587 644 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 PABPC1L2AQ5JQF8 200 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 THEM4Q5T1C6 240 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 HHATQ5VTY9 493 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 LEG1Q6P5S2 330 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 MSRB3Q8IXL7 192 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 NOXO1Q8NFA2 376 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 SLC25A40Q8TBP6 338 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 MCHR2Q969V1 340 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 OR52B2Q96RD2 323 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 DCLRE1CQ96SD1 692 aaKnown RBP13.51□□□□□ -0.25
CXCL1-202ENST00000509101 MCHR1Q99705 422 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 MRI1Q9BV20 369 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 SLITRK2Q9H156 845 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 TMBIM4Q9HC24 238 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 NANSQ9NR45 359 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 NPTNQ9Y639 398 aa13.51□□□□□ -0.25
CXCL1-202ENST00000509101 CPSF4LA6NMK7 179 aaKnown RBP13.5□□□□□ -0.25
CXCL1-202ENST00000509101 TRAPPC2LH3BP13 241 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 CHP2O43745 196 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 SNNO75324 88 aaPredicted RBP13.5□□□□□ -0.25
CXCL1-202ENST00000509101 SBK2P0C263 348 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF12P17014 697 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 STOMP27105 288 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 SEC61A1P61619 476 aaKnown RBP13.5□□□□□ -0.25
CXCL1-202ENST00000509101 SLC9A3R2Q15599 337 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 NRN1LQ496H8 165 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 LINC00114Q6XXX2 140 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 RFPL4BQ6ZWI9 263 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 MAVSQ7Z434 540 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 CROCCP2Q86T23 111 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 ARMC8Q8IUR7 673 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 SMYD1Q8NB12 490 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 SYT14Q8NB59 555 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 MARS2Q96GW9 593 aaKnown RBP13.5□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 OR2J1Q9GZK6 312 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 MS4A7Q9GZW8 240 aaPredicted RBP13.5□□□□□ -0.25
CXCL1-202ENST00000509101 SLCO1B3Q9NPD5 702 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 THAP1Q9NVV9 213 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 WNK1Q9H4A3 2382 aa13.5□□□□□ -0.25
CXCL1-202ENST00000509101 IGHV3OR16-10A0A075B7F0 116 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 C5orf49A4QMS7 147 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 MCIDASD6RGH6 385 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 UMPSP11172 480 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 OMGP23515 440 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 SLC6A2P23975 617 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 WDR4P57081 412 aaKnown RBP13.49□□□□□ -0.25
CXCL1-202ENST00000509101 MAGOHP61326 146 aaKnown RBP13.49□□□□□ -0.25
CXCL1-202ENST00000509101 LRIF1Q5T3J3 769 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF613Q6PF04 617 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 NANOGNBQ7Z5D8 188 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 JAZF1Q86VZ6 243 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 HIPK4Q8NE63 616 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 BHLHE22Q8NFJ8 381 aaPredicted RBP13.49□□□□□ -0.25
CXCL1-202ENST00000509101 KLF14Q8TD94 323 aaPredicted RBP13.49□□□□□ -0.25
CXCL1-202ENST00000509101 TLCD1Q96CP7 247 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 IKZF5Q9H5V7 419 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 MSL2Q9HCI7 577 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 CCNB1IP1Q9NPC3 277 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 SLAMF8Q9P0V8 285 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 EIF3KQ9UBQ5 218 aaKnown RBP13.49□□□□□ -0.25
CXCL1-202ENST00000509101 EGFL7Q9UHF1 273 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 INSIG2Q9Y5U4 225 aa13.49□□□□□ -0.25
CXCL1-202ENST00000509101 LOC100509620A0A075B734 347 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 CLDN34H7C241 214 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 MGRN1O60291 552 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 SERPINB7O75635 380 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 SLC2A10O95528 541 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 GPANK1O95872 356 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 OPN1SWP03999 348 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 ADH4P08319 380 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF32P17041 273 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 CDAP32320 146 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 TNFAIP6P98066 277 aaPredicted RBP13.48□□□□□ -0.25
CXCL1-202ENST00000509101 NPTX1Q15818 432 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 HIST3H3Q16695 136 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 ENTPD8Q5MY95 495 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 MBNL2Q5VZF2 373 aaKnown RBP13.48□□□□□ -0.25
CXCL1-202ENST00000509101 TTC33Q6PID6 262 aaPredicted RBP13.48□□□□□ -0.25
CXCL1-202ENST00000509101 SPATC1Q76KD6 591 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 KLHL36Q8N4N3 616 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 SPICQ8N5J4 248 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 AKR7LQ8NHP1 331 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 ABHD4Q8TB40 342 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 POM121L2Q96KW2 1035 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 DIRC2Q96SL1 478 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 ARHGDIGQ99819 225 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 KCNN2Q9H2S1 579 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 EVA1AQ9H8M9 152 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 PATZ1Q9HBE1 687 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms