RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 PITPNC1Q9UKF7 332 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 VANGL2Q9ULK5 521 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 PSG8Q9UQ74 426 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 ST3GAL6Q9Y274 331 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 SCN2AQ99250 2005 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 CENPJQ9HC77 1338 aaPredicted RBP2.13□□□□□ -2.07
LSM6-205ENST00000507449 USP47Q96K76 1375 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 IGLV11-55A0A075B6I3 123 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 GLYATL1P3A0A0U1RQE8 302 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 SNAI2O43623 268 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 SRP72O76094 671 aaKnown RBP2.12□□□□□ -2.07
LSM6-205ENST00000507449 FTH1P02794 183 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 SERPINA5P05154 406 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 PLEKP08567 350 aaPredicted RBP2.12□□□□□ -2.07
LSM6-205ENST00000507449 ZNF250P15622 560 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 ZNF823P16415 610 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 MAS1LP35410 378 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 ZNF138P52744 262 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 MXD1Q05195 221 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 POU2AF1Q16633 256 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 OR52W1Q6IF63 320 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 DNAJC24Q6P3W2 148 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 CERS6Q6ZMG9 384 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 ZFP2Q6ZN57 461 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 TIFABQ6ZNK6 161 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 CCDC73Q6ZRK6 1079 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 H2AFVQ71UI9 128 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 PEX26Q7Z412 305 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 ZFP41Q8N8Y5 198 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 PRELID2Q8N945 189 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 ZNF502Q8TBZ5 544 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 SLC38A4Q969I6 547 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 FAM3DQ96BQ1 224 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 ZNF578Q96N58 590 aaPredicted RBP2.12□□□□□ -2.07
LSM6-205ENST00000507449 TMEM185BQ9H7F4 350 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 SLC40A1Q9NP59 571 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 CD84Q9UIB8 345 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 KLK12Q9UKR0 248 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 TBX21Q9UL17 535 aa2.12□□□□□ -2.07
LSM6-205ENST00000507449 MN1Q10571 1320 aaPredicted RBP2.12□□□□□ -2.07
LSM6-205ENST00000507449 NINLQ9Y2I6 1382 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 NACAE9PAV3 2078 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 ARHGAP21Q5T5U3 1957 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 IGLV4-69A0A075B6H9 119 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 TRBV11-1A0A0K0K1C0 115 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 A0A1B0GVX0 72 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 SMCO2A6NFE2 343 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 LRRIQ3A6PVS8 624 aaPredicted RBP2.11□□□□□ -2.07
LSM6-205ENST00000507449 C9JVG2 144 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 DYNC1I1O14576 645 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 ICOSLGO75144 302 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 WBP4O75554 376 aaKnown RBP2.11□□□□□ -2.07
LSM6-205ENST00000507449 OR2F2O95006 317 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 ZNF24P17028 368 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 GPX4P36969 197 aaPredicted RBP2.11□□□□□ -2.07
LSM6-205ENST00000507449 TNNT2P45379 298 aaPredicted RBP2.11□□□□□ -2.07
LSM6-205ENST00000507449 UBE2AP49459 152 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 RND2P52198 227 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 CRISP1P54107 249 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 PRRX1P54821 245 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 GBE1Q04446 702 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 EBI3Q14213 229 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 GGTLC2Q14390 218 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 CLINT1Q14677 625 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 ZNF726P1Q15940 193 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 ZSCAN26Q16670 478 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 PPM1LQ5SGD2 360 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 REEP3Q6NUK4 255 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 TMEM220Q6QAJ8 160 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 TEX43Q6ZNM6 134 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 Q6ZR03 302 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 PCP2Q8IVA1 136 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 FAM86B1Q8N7N1 296 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 OR10J6PQ8NGY7 276 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 OR4S2Q8NH73 311 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 NRGNQ92686 78 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 SERPINB12Q96P63 405 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 OR5B12Q96R08 314 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 TGS1Q96RS0 853 aaKnown RBP2.11□□□□□ -2.07
LSM6-205ENST00000507449 SDHCQ99643 169 aaPredicted RBP2.11□□□□□ -2.07
LSM6-205ENST00000507449 SLC17A9Q9BYT1 436 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 FAM192AQ9GZU8 254 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 NEK6Q9HC98 313 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 ZNF160Q9HCG1 818 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 KCNJ16Q9NPI9 418 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 LHX9Q9NQ69 397 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 GPATCH2LQ9NWQ4 482 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 ZNF629Q9UEG4 869 aaPredicted RBP2.11□□□□□ -2.07
LSM6-205ENST00000507449 RAB26Q9ULW5 256 aa2.11□□□□□ -2.07
LSM6-205ENST00000507449 CARMIL3Q8ND23 1372 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 AKNAQ7Z591 1439 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 IGLV3-16A0A075B6K0 115 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 IGHV3-66A0A0C4DH42 116 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 SMCO3A2RU48 225 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 SGK1O00141 431 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 AIM2O14862 343 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 ANGPTL7O43827 346 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 HMMRO75330 724 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 H6PDO95479 791 aa2.1□□□□□ -2.07
LSM6-205ENST00000507449 AGTP01019 485 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms