RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 DRAM2Q6UX65 266 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 OR4K17Q8NGC6 315 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 VWCEQ96DN2 955 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 SERINC2Q96SA4 455 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 OR51M1Q9H341 326 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 CYTL1Q9NRR1 136 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 MSRAQ9UJ68 235 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 TTLL8A6PVC2 850 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 FBXO45P0C2W1 286 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 LIPCP11150 499 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 TLX1P31314 330 aaPredicted RBP15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 PPICP45877 212 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 MESP2Q0VG99 397 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 PPP1R1AQ13522 171 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 EXOSC7Q15024 291 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 SCGB2B2Q4G0G5 96 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 C12orf40Q86WS4 652 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 ZSCAN1Q8NBB4 408 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 NT5CQ8TCD5 201 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 WFIKKN2Q8TEU8 576 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 NXPE3Q969Y0 559 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 SELENOIQ9C0D9 397 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 CRISPLD2Q9H0B8 497 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 IKZF2Q9UKS7 526 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 KCNK6Q9Y257 313 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 HCFC2Q9Y5Z7 792 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 SLC22A7Q9Y694 548 aa15.47■□□□□ 0.07
SQSTM1-211ENST00000506690 TRBV6-7A0A0A0MS04 114 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 C9orf170A2RU37 121 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 LRRC72A6NJI9 287 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 DCNP07585 359 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 CD14P08571 375 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 SMIM10L1P0DMW3 83 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 PBX2P40425 430 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 PRPS1P60891 318 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 DEFB103AP81534 67 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 RASGEF1BQ0VAM2 473 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 AIMP2Q13155 320 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 ELOCQ15369 112 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 ODF4Q2M2E3 257 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 DEFB134Q4QY38 66 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 TMED6Q8WW62 240 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 FOXRED1Q96CU9 486 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 SMIM10Q96HG1 83 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 CST11Q9H112 138 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 SLC2A8Q9NY64 477 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 FARSAQ9Y285 508 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 MKI67P46013 3256 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 A0A087WUJ7 227 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 EDDM13A0A1B0GTR0 161 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 SSX5O60225 188 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 ABCD3P28288 659 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 P2RY2P41231 377 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 KIR3DL2P43630 455 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 MGAT2Q10469 447 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 PRICKLE4Q2TBC4 344 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 ASPHD2Q6ICH7 369 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 C5orf46Q6UWT4 87 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 SLC41A2Q96JW4 573 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 C4orf45Q96LM5 186 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 PHB2Q99623 299 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 TEX101Q9BY14 249 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 BCL2L14Q9BZR8 327 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 LAMP5Q9UJQ1 280 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 DTX4Q9Y2E6 619 aa15.46■□□□□ 0.07
SQSTM1-211ENST00000506690 TRPM6Q9BX84 2022 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF705EA8MWA4 302 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 GPR89AB7ZAQ6 455 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 PRRT4C9JH25 899 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 NKX2-2O95096 273 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 FARS2O95363 451 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 CRHP06850 196 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 GPR89BP0CG08 455 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 MUC1P15941 1255 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF28P17035 718 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 PSMB6P28072 239 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 AVPR2P30518 371 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 RPS15AP62244 130 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 EGR3Q06889 387 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 DHCR24Q15392 516 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 EIF2S3LQ2VIR3 472 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 PRRT3Q5FWE3 981 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 C1orf53Q5VUE5 145 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF627Q7L945 461 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 TMPRSS9Q7Z410 1059 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 C15orf54Q8N8G6 183 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 THRSPQ92748 146 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 MRGPRFQ96AM1 343 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 RSPRY1Q96DX4 576 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 DCBLD2Q96PD2 775 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 LMAN2LQ9H0V9 348 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 WBP1LQ9NX94 342 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 FAM96BQ9Y3D0 163 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 OR1A2Q9Y585 309 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 IGLON5A6NGN9 336 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 DCTN6O00399 190 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 CT62P0C5K7 136 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF44P15621 663 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 CBR1P16152 277 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 ALOX5APP20292 161 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms