RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 ALX4Q9H161 411 aaPredicted RBP10.74□□□□□ -0.69
UBE3D-206ENST00000505226 ELOVL3Q9HB03 270 aa10.74□□□□□ -0.69
UBE3D-206ENST00000505226 C2orf74A8MZ97 194 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 CCSO14618 274 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 CFPP27918 469 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 SCAND1P57086 179 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 MOGAT2Q3SYC2 334 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 ATPAF1Q5TC12 328 aaPredicted RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 EEF1A1P5Q5VTE0 462 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 C12orf45Q8N5I9 185 aaPredicted RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF321PQ8N8H1 164 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 TSEN15Q8WW01 171 aaKnown RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 SEC22AQ96IW7 307 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 G6PC3Q9BUM1 346 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 SLC25A32Q9H2D1 315 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 SFXN1Q9H9B4 322 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 CPNE7Q9UBL6 633 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 MRPS18BQ9Y676 258 aaKnown RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 LOC100289279A0A1B0GTE1 492 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 TMEM82A0PJX8 343 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 OR5H14A6NHG9 310 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 SLC17A2O00624 439 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 PRAMEF2O60811 474 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 APEHP13798 732 aaKnown RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 MGMTP16455 207 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 PRKACAP17612 351 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 DEFA5Q01523 94 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 MFGE8Q08431 387 aaPredicted RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 EIF2B5Q13144 721 aaKnown RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 SKP2Q13309 424 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF169Q14929 603 aaPredicted RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 MEP1BQ16820 701 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 LRRC37A5PQ49AS3 106 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 OR10K2Q6IF99 312 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 MOB3CQ70IA8 216 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 NDUFAF7Q7L592 441 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 STEAP2Q8NFT2 490 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 OR10Z1Q8NGY1 313 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 FAM174AQ8TBP5 190 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 OR10A5Q9H207 317 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 A0A0J9YY10 115 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 SRPX2O60687 465 aaPredicted RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 GDI1P31150 447 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 LUMP51884 338 aaPredicted RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 EGR3Q06889 387 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 RAB11BQ15907 218 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF542PQ5EBM4 170 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 WBP2NLQ6ICG8 309 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 MED25Q71SY5 747 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 MCATQ8IVS2 390 aaKnown RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF615Q8N8J6 731 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 AVL9Q8NBF6 648 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 INTS14Q96SY0 518 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 CCDC3Q9BQI4 270 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 TMEM185BQ9H7F4 350 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 EPHA6Q9UF33 1036 aa10.73□□□□□ -0.69
UBE3D-206ENST00000505226 CGGBP1Q9UFW8 167 aaPredicted RBP10.73□□□□□ -0.69
UBE3D-206ENST00000505226 A0A1B0GTI1 187 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 WIPF3A6NGB9 483 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 RAB3DO95716 219 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 CD8AP01732 235 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF28P17035 718 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 DHRS2Q13268 280 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 MANEAQ5SRI9 462 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 TMEM240Q5SV17 173 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 TMEM184AQ6ZMB5 413 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 BEST3Q8N1M1 668 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 OR4S1Q8NGB4 309 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 OR51A2Q8NGJ7 313 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 OR13C8Q8NGS7 320 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 OTOSQ8NHW6 89 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 FGF14Q92915 247 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 PELOQ9BRX2 385 aaKnown RBP10.72□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF416Q9BWM5 594 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 PCNX3Q9H6A9 2034 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 RNF222A6NCQ9 220 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 PMS2P2O95744 297 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 MELTFP08582 738 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 HOXC4P09017 264 aaPredicted RBP10.72□□□□□ -0.69
UBE3D-206ENST00000505226 VEGFBP49765 207 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 CORO6Q6QEF8 472 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF627Q7L945 461 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 METTL27Q8N6F8 245 aaPredicted RBP10.72□□□□□ -0.69
UBE3D-206ENST00000505226 PHOSPHO1Q8TCT1 267 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 BADQ92934 168 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 MRGPRFQ96AM1 343 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 SLC6A7Q99884 636 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 OBP2AQ9NY56 170 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 GTF2A1LQ9UNN4 478 aa10.72□□□□□ -0.69
UBE3D-206ENST00000505226 TMEM184BQ9Y519 407 aaPredicted RBP10.72□□□□□ -0.69
UBE3D-206ENST00000505226 CDC40O60508 579 aaKnown RBP eCLIP10.71□□□□□ -0.69
UBE3D-206ENST00000505226 ZNF432O94892 652 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 AMY2AP04746 511 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 HTRA3P83110 453 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 RASGEF1BQ0VAM2 473 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 SLC17A1Q14916 467 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 ATXN7L3Q14CW9 347 aaPredicted RBP10.71□□□□□ -0.69
UBE3D-206ENST00000505226 TOMM34Q15785 309 aaPredicted RBP10.71□□□□□ -0.69
UBE3D-206ENST00000505226 GLYATL3Q5SZD4 288 aa10.71□□□□□ -0.69
UBE3D-206ENST00000505226 LIN54Q6MZP7 749 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms