RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 KANK2Q63ZY3 851 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 DHRS7BQ6IAN0 325 aaPredicted RBP3.02□□□□□ -1.93
USP46-205ENST00000504078 C8orf74Q6P047 294 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 C6orf89Q6UWU4 347 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 C1orf122Q6ZSJ8 110 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 Q6ZSV7 163 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 CYS1Q717R9 158 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 NLRC3Q7RTR2 1065 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 COMTD1Q86VU5 262 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 RNF130Q86XS8 419 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 SLC22A9Q8IVM8 553 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 C10orf107Q8IVU9 208 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 UEVLDQ8IX04 471 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 SKA3Q8IX90 412 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 C20orf196Q8IYI0 205 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 OR5AS1Q8N127 324 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 C4orf33Q8N1A6 199 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 CLIP4Q8N3C7 705 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 LRRC18Q8N456 261 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 C10orf53Q8N6V4 93 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 PIK3C3Q8NEB9 887 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 SPATA4Q8NEY3 305 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 OR4K5Q8NGD3 323 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 OR10AD1Q8NGE0 317 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 AKR7LQ8NHP1 331 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 ZNF420Q8TAQ5 688 aaPredicted RBP3.02□□□□□ -1.93
USP46-205ENST00000504078 SLC25A40Q8TBP6 338 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 ZNF764Q96H86 408 aaPredicted RBP3.02□□□□□ -1.93
USP46-205ENST00000504078 TECTBQ96PL2 329 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 ARHGDIGQ99819 225 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 SLC30A2Q9BRI3 323 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 SSBP3Q9BWW4 388 aaPredicted RBP3.02□□□□□ -1.93
USP46-205ENST00000504078 DPY30Q9C005 99 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 OR2J1Q9GZK6 312 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 RAB17Q9H0T7 212 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 MEAF6Q9HAF1 191 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 PATZ1Q9HBE1 687 aaKnown RBP3.02□□□□□ -1.93
USP46-205ENST00000504078 EXOSC3Q9NQT5 275 aaKnown RBP3.02□□□□□ -1.93
USP46-205ENST00000504078 TMEM106BQ9NUM4 274 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 EXD2Q9NVH0 621 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 NECAP2Q9NVZ3 263 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 PLA2G2DQ9UNK4 145 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 ANGPT4Q9Y264 503 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 RASD1Q9Y272 281 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 ZNF443Q9Y2A4 671 aaPredicted RBP3.02□□□□□ -1.93
USP46-205ENST00000504078 DNAJC15Q9Y5T4 150 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 TNFRSF18Q9Y5U5 241 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 SAR1BQ9Y6B6 198 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 WNK1Q9H4A3 2382 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 NOTCH3Q9UM47 2321 aa3.02□□□□□ -1.93
USP46-205ENST00000504078 RYR2Q92736 4967 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 DNAH3Q8TD57 4116 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 DSPPQ9NZW4 1301 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 IGKV1D-42A0A075B6H8 117 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 IGLV3-9A0A075B6K5 115 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 ZNF816-ZNF321PA0A0X1KG74 233 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 WI2-2373I1.2A0A1W2PRP0 233 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 PLSCR5A0PG75 271 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 AGAP5A6NIR3 686 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 A8MXK9 166 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 TMEM114B3SHH9 223 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 RPL36A-HNRNPH2H7BZ11 118 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 KPNA4O00629 521 aaPredicted RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 AIM2O14862 343 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 CLPXO76031 633 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 URI1O94763 535 aaPredicted RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 CHEK2O96017 543 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 MT-ND5P03915 603 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 OPN1MWP04001 364 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 OPN1MW2P0DN77 364 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 OPN1MW3P0DN78 364 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 NR2F1P10589 423 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 ETFAP13804 333 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 UQCRBP14927 111 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 ZNF250P15622 560 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 IL7RP16871 459 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 RPS4Y1P22090 263 aaKnown RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 AHCYP23526 432 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 PRPH2P23942 346 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 HTR2AP28223 471 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 ARRB2P32121 409 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 CDAP32320 146 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 ACAA2P42765 397 aaKnown RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 SLC6A9P48067 706 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 CLK1P49759 484 aaKnown RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 SELENOVP59797 346 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 HSF2Q03933 536 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 PAX8Q06710 450 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 CD69Q07108 199 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 PCLAFQ15004 111 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 PDCD1Q15116 288 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 TAF11Q15544 211 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 C21orf62-AS1Q17RA5 79 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 LSM12Q3MHD2 195 aaKnown RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 LIN52Q52LA3 116 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 XKR7Q5GH72 579 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 DMRTC1Q5HYR2 192 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 SPANXN4Q5MJ08 99 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 FOXB2Q5VYV0 432 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 WBP2NLQ6ICG8 309 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms