RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 BLVRAP53004 296 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF679Q8IYX0 411 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 FAM109AQ8N4B1 249 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 C8orf44Q96CB5 159 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 NXPE2Q96DL1 559 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 SORCS2Q96PQ0 1159 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF587Q96SQ5 575 aaPredicted RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 DPYSL5Q9BPU6 564 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 MESP1Q9BRJ9 268 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 TXNIPQ9H3M7 391 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 EIF3KQ9UBQ5 218 aaKnown RBP8.88□□□□□ -0.99
CLIP1-204ENST00000501271 FBXL3Q9UKT7 428 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 GTF2A1LQ9UNN4 478 aa8.88□□□□□ -0.99
CLIP1-204ENST00000501271 CFAP54Q96N23 3096 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 A0A1B0GX78 115 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 SLC22A23A1A5C7 686 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 GGT3PA6NGU5 568 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 A8MVM7 634 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 LEUTXA8MZ59 168 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 TNFRSF10AO00220 468 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 PLPP3O14495 311 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 MBTPS2O43462 519 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 DUX1O43812 170 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 KDM4BO94953 1096 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 NDUFB6O95139 128 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 HLA-DOBP13765 273 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 CFPP27918 469 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 POU3F4P49335 361 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 P2RX3P56373 397 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 SCAND1P57086 179 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 ADAM8P78325 824 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 GUCA2AQ02747 115 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 UBXN2BQ14CS0 331 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 COL28A1Q2UY09 1125 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 PCGF3Q3KNV8 242 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 TEX30Q5JUR7 227 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 OR5M10Q6IEU7 315 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 OR7E24Q6IFN5 339 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 SLC18B1Q6NT16 456 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 ANKRD16Q6P6B7 361 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 GRINAQ7Z429 371 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 KDM8Q8N371 416 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 CADM4Q8NFZ8 388 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 RNF128Q8TEB7 428 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 DUSP19Q8WTR2 217 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 UTP23Q9BRU9 249 aaKnown RBP8.87□□□□□ -0.99
CLIP1-204ENST00000501271 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
CLIP1-204ENST00000501271 CHIAQ9BZP6 476 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 MGAT4CQ9UBM8 478 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF69Q9UC07 566 aa8.87□□□□□ -0.99
CLIP1-204ENST00000501271 CIB4A0PJX0 185 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 H7C417 338 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 GPR37O15354 613 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 NUDT21O43809 227 aaKnown RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 OR6A2O95222 327 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 MPZL1O95297 269 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 IGHMP01871 453 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 IGFBP4P22692 258 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 ROM1Q03395 351 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 TDGQ13569 410 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 CSRP2Q16527 193 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 YOD1Q5VVQ6 348 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 NDUFAF7Q7L592 441 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 PLXDC1Q8IUK5 500 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 OR8H3Q8N146 312 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 FTMTQ8N4E7 242 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 OR4D10Q8NGI6 311 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 OR4C16Q8NGL9 310 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 C15orf40Q8WUR7 153 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 ASB17Q8WXJ9 295 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 SLC41A2Q96JW4 573 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 DPCDQ9BVM2 203 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 FOXQ1Q9C009 403 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 PLSCR2Q9NRY7 297 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 PIPOXQ9P0Z9 390 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 MTFP1Q9UDX5 166 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 C2orf72A6NCS6 295 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 MEIS3P1A6NDR6 274 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 FTCDNL1E5RQL4 147 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 PYCARD-AS1I3L0S3 204 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF354AO60765 605 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 MECP2P51608 486 aaKnown RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 CAMK2BQ13554 666 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 EIF2B1Q14232 305 aaKnown RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF626Q68DY1 528 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 COX15Q7KZN9 410 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 KRT77Q7Z794 578 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 BPHLQ86WA6 291 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 WDFY1Q8IWB7 410 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 PLPP7Q8NBV4 271 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 OR52B4Q8NGK2 314 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 TTC9Q92623 222 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 ZNF501Q96CX3 271 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 WDR89Q96FK6 387 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-204ENST00000501271 ABHD6Q9BV23 337 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 SLC22A11Q9NSA0 550 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 FGF21Q9NSA1 209 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 LRP12Q9Y561 859 aa8.86□□□□□ -0.99
CLIP1-204ENST00000501271 WDR87Q6ZQQ6 2873 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms