RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 MCHR2Q969V1 340 aa12.42□□□□□ -0.42
TRAF4-212ENST00000498540 MARS2Q96GW9 593 aaKnown RBP12.42□□□□□ -0.42
TRAF4-212ENST00000498540 NPHS2Q9NP85 383 aa12.42□□□□□ -0.42
TRAF4-212ENST00000498540 NANSQ9NR45 359 aa12.42□□□□□ -0.42
TRAF4-212ENST00000498540 PLEK2Q9NYT0 353 aa12.42□□□□□ -0.42
TRAF4-212ENST00000498540 VAPAQ9P0L0 249 aa12.42□□□□□ -0.42
TRAF4-212ENST00000498540 PLSCR5A0PG75 271 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 CPSF4LA6NMK7 179 aaKnown RBP12.41□□□□□ -0.42
TRAF4-212ENST00000498540 TRAPPC2LH3BP13 241 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 LYPD3O95274 346 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 IGHV2-70P01814 119 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 IGHG1P01857 330 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 STOMP27105 288 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 GCH1P30793 250 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 CLRN1P58418 232 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 SEC61A1P61619 476 aaKnown RBP12.41□□□□□ -0.42
TRAF4-212ENST00000498540 IL13RA1P78552 427 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 SLC3A1Q07837 685 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 ZNF154Q13106 437 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 ZNF718Q3SXZ3 478 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 ZNF613Q6PF04 617 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 RFPL4BQ6ZWI9 263 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 MREGQ8N565 214 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 SYT14Q8NB59 555 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 NOXO1Q8NFA2 376 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 BHLHE22Q8NFJ8 381 aaPredicted RBP12.41□□□□□ -0.42
TRAF4-212ENST00000498540 SLC25A40Q8TBP6 338 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 ZNF607Q96SK3 696 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 GPA33Q99795 319 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 OR2J1Q9GZK6 312 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 EGLN1Q9GZT9 426 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 TMEM38AQ9H6F2 299 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 SLCO1B3Q9NPD5 702 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 NPTNQ9Y639 398 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 AUP1Q9Y679 476 aa12.41□□□□□ -0.42
TRAF4-212ENST00000498540 NOTCH1P46531 2555 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 LOC100509620A0A075B734 347 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 TRBV5-3A0A0A0MS03 114 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 A0A0G2JK05 382 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 MGRN1O60291 552 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 FMO6PO60774 539 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 SERPINB7O75635 380 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 IGHMP01871 453 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 ADH4P08319 380 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 SBK2P0C263 348 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 ASAH2BP0C7U1 165 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 ZNF12P17014 697 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 MDKP21741 143 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-212ENST00000498540 SLC6A2P23975 617 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 CDAP32320 146 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 ZNF84P51523 738 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 SLC9A3R2Q15599 337 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 PAGE3Q5JUK9 113 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 ENTPD8Q5MY95 495 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 MBNL2Q5VZF2 373 aaKnown RBP12.4□□□□□ -0.42
TRAF4-212ENST00000498540 LEG1Q6P5S2 330 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 TSPYL5Q86VY4 417 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-212ENST00000498540 FUNDC1Q8IVP5 155 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 OR6T1Q8NGN1 323 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 KLF14Q8TD94 323 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-212ENST00000498540 SLC25A28Q96A46 364 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 POM121L2Q96KW2 1035 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 DCLRE1CQ96SD1 692 aaKnown RBP12.4□□□□□ -0.42
TRAF4-212ENST00000498540 SEPHS2Q99611 448 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 ARHGDIGQ99819 225 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 MRPL13Q9BYD1 178 aaKnown RBP12.4□□□□□ -0.42
TRAF4-212ENST00000498540 MSL2Q9HCI7 577 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 ZNF229Q9UJW7 825 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 POLR3KQ9Y2Y1 108 aaPredicted RBP12.4□□□□□ -0.42
TRAF4-212ENST00000498540 CMYA5Q8N3K9 4069 aa12.4□□□□□ -0.42
TRAF4-212ENST00000498540 PRKDCP78527 4128 aaKnown RBP12.39□□□□□ -0.43
TRAF4-212ENST00000498540 C5orf49A4QMS7 147 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 POM121CA8CG34 1229 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 SLC2A10O95528 541 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 OPN1SWP03999 348 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 F13BP05160 661 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 UMPSP11172 480 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 ZNF32P17041 273 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 PPIBP23284 216 aaKnown RBP12.39□□□□□ -0.43
TRAF4-212ENST00000498540 DUSP7Q16829 419 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 C10orf128Q5T292 105 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 TTC33Q6PID6 262 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-212ENST00000498540 NANOGNBQ7Z5D8 188 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 RBM45Q8IUH3 476 aaKnown RBP12.39□□□□□ -0.43
TRAF4-212ENST00000498540 HIPK4Q8NE63 616 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 GPR32P1Q8NGA4 272 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 OR4D11Q8NGI4 311 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 ADAMTS16Q8TE57 1224 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 ASB10Q8WXI3 467 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 NABP1Q96AH0 204 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 SLITRK2Q9H156 845 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 EVA1AQ9H8M9 152 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 CCNB1IP1Q9NPC3 277 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 EGFL7Q9UHF1 273 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 SLC7A7Q9UM01 511 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 UGT2A1Q9Y4X1 527 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 INSIG2Q9Y5U4 225 aa12.39□□□□□ -0.43
TRAF4-212ENST00000498540 SOX21Q9Y651 276 aaPredicted RBP12.39□□□□□ -0.43
TRAF4-212ENST00000498540 GMEB1Q9Y692 573 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms